Gene Information

Name : kdsD (BDGL_000521)
Accession : YP_004994789.1
Strain : Acinetobacter calcoaceticus PHEA-2
Genome accession: NC_016603
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 555455 - 556432 bp
Length : 978 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAATCCTACAGATTTCCAAAGCAGCGCATTAGCAACATTGCGTATTGAGCAACAAGCCTTAGACGTGTTAGCAAC
ACAAATTGGTGACAGTTTTAACCGAGCTTGTGAAATATTGTTACAGTGTAAAGGTCGTGTTGTGATCACTGGCATGGGTA
AGTCAGGGCATATTGGCCGTAAAATGGCTGCAACTTTCGCCTCAACTGGTACTCCATCTTTCTTTATGCATCCAGGCGAA
GCTGGACATGGCGATTTGGGTATGCTGGTTCGTGGTGATGTTTTAATTGCGATTTCCAACTCTGGAAAAAGCGATGAAAT
CATGATGTTGATGCCTTTAATCAAACATCTTGGCGTTCCTCTTATTACCATTAGCCGTGATGATAAAGGCCCAATGCCGC
AAAATGCTGACATCGCTTTAACTTTAGGTGAGTCTGATGAGGCATGTCCATTAGGTTTGGCGCCTACCTCAAGTACGACA
GCAACTTTAGTATTGGGTGATGCACTGGCCGTTGCTTTACTTGAAGCACGTGGTTTTACCGCAGATGATTTTGCTCGTTC
GCATCCAGCAGGTGCGTTGGGTAAACGCTTACTTTTACATGTAAAACATCTGATGCATACAGGCGATGAACTGCCAAAAG
TTTCACCAGATACACCAATGAATCAAGTGCTTTATGAAATTTCTAATAAACGTTTAGGCTTGACGACAATTGTAGATGAA
CAAGAACATTTACTTGGTATTTTCACCGATGGTGACTTGCGCCGTTTAATTGATAAACAGCAAGGTTTTGATGTGAATTT
GCCTGTTTCAGAAGTGATGACAAAAAAACCATCAACGATTTCTCAAGAGGCACGTGCGGTAGAAGCTCTACAACAGCTGA
ACCTGAAAAAAATTAGTCAGTTTGTGGTGGTAGATGACCAAAACAAAGTGATTGGTGTAATTAGTATGCATGACCTTATT
CAGGCAGGGGTAAATTAA

Protein sequence :
MPNPTDFQSSALATLRIEQQALDVLATQIGDSFNRACEILLQCKGRVVITGMGKSGHIGRKMAATFASTGTPSFFMHPGE
AGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTT
ATLVLGDALAVALLEARGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTPMNQVLYEISNKRLGLTTIVDE
QEHLLGIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNLKKISQFVVVDDQNKVIGVISMHDLI
QAGVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 5e-53 43
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 6e-53 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 9e-53 42