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Name : xcpR (BDGL_003523) Accession : YP_004997791.1 Strain : Acinetobacter calcoaceticus PHEA-2 Genome accession: NC_016603 Putative virulence/resistance : Virulence Product : general secretion pathway protein E (type II traffic warden ATPase) Function : - COG functional category : - COG ID : - EC number : - Position : 3782125 - 3783615 bp Length : 1491 bp Strand : + Note : - DNA sequence : ATGCAAATATTGAAACAAATACAAGTTCCATATAGTTTTGCCAAGCGTCATGGTGTTTTATTTCGTTATGACGGTGATCA GGTATTTATTATTAGACGTCAAAACACTGAAAAAATTGCATTACAGGAAGCAAGACGCATCTTGGGTAAGCCAGCTCATT ATCAATTATGTACTGAACAAGAATTTAATACGCTCTTAAGTACGAGTTATGCAGGTGATACAGGGGAATCACAACAAGTT GCAGCTGGTTTAGAAGATCATCCAGATTTATTGAGTTTGGCCGATCAGGTTCCTGAAACAGAAGATTTGATGGACCAAGA AGATGACGCACCTATTGTTCGTCTGATCAATGCGCTACTCTCTGAGGCAATTCGAGTAGGGGCTTCTGATATTCATATTG AAGCTTTTGAAAAGAAACTATCTGTACGATTACGTGTAGATGGACAATTACGTGAGATTGTACAACCACGCCGTGAGTTA GCGCCTTTATTAGTCTCGCGTATTAAAGTTATGGCGAAGCTCGATATTGCTGAAAAACGTGTACCACAAGATGGTCGTAT TTCTTTACGTCTTGCAGGCCGTGAAGTGGATGTGCGTGTTTCAACTTTGCCATCGTCACATGGTGAAAGGGTCGTTATGC GTTTGCTTGATAAACAAGCGGGCCGACTCAACATGACTCACTTGGGTTTAATGACTAATGACTATGAGCGTTTAACTCAG TTAGTGCATCGTCCTCACGGTATTATTTTGGTCACAGGACCTACTGGTTCGGGGAAAACGACCACCTTATATGCCGCCTT GTCTGATCTAAACGACAATACCCGTAATATCTTAACTGCTGAAGATCCAATCGAGTATCAACTCGAAGGTATTGGTCAAA CACAAGTGAATACCAAAGTGGATATGACATTTGCTCGTGCTTTAAAAGCAATGTTACGTCAAGATCCTGATGTTGTAATG GTGGGGGAGATCCGTGATCTGGAAACTGCTGAAATTGCGGTTCAAGCATCTTTAACAGGCCATTTGGTTTTATCAACACT ACATACCAATACAGCTATTGGTGCAGTTACTCGTCTTAAAGATATGGGGATTGAACCCTTCTTGTTATCAAGCTCTTTAA TTGGGGTGATTGCTCAACGTTTGGTTCGTACTTTATGTCCACATTGTATGACATGGCGTGAAGCCGATACTTTTGAGAAA CAGGTTTTTCAGCATATTAATAATGAACCGTTGTTGCAGTTACCTGAAGCCAAAGGGTGCGATCATTGCTCACATTTAGG TTTTAATGGACGTACAGCGATTTATGAAATCGTACCAGTTGATGAACCCATGCGCCGTCTGATTCATGGTAATGCAGCTG AATATGAATTAGAAAATCATGCTCGTGAGTATTCAGGTTCTATTCGTGATGATGGTTTGCGCAAAGTACTAGCGGGTAAA ACTACACTCGAAGAAGTGCTTCGTGTAACTAATGAGGCAAGTGAAGCATAA Protein sequence : MQILKQIQVPYSFAKRHGVLFRYDGDQVFIIRRQNTEKIALQEARRILGKPAHYQLCTEQEFNTLLSTSYAGDTGESQQV AAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRREL APLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMTNDYERLTQ LVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVM VGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVIAQRLVRTLCPHCMTWREADTFEK QVFQHINNEPLLQLPEAKGCDHCSHLGFNGRTAIYEIVPVDEPMRRLIHGNAAEYELENHAREYSGSIRDDGLRKVLAGK TTLEEVLRVTNEASEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-134 | 59 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-134 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_004997791.1 | general secretion pathway protein E (type II traffic warden ATPase) | VFG0182 | Protein | 3e-143 | 65 |
| xcpR | YP_004997791.1 | general secretion pathway protein E (type II traffic warden ATPase) | VFG2048 | Protein | 7e-134 | 59 |
| xcpR | YP_004997791.1 | general secretion pathway protein E (type II traffic warden ATPase) | VFG1876 | Protein | 1e-130 | 56 |
| xcpR | YP_004997791.1 | general secretion pathway protein E (type II traffic warden ATPase) | VFG0233 | Protein | 2e-85 | 48 |
| xcpR | YP_004997791.1 | general secretion pathway protein E (type II traffic warden ATPase) | VFG2426 | Protein | 3e-75 | 47 |
| xcpR | YP_004997791.1 | general secretion pathway protein E (type II traffic warden ATPase) | VFG1880 | Protein | 6e-81 | 42 |
