Gene Information

Name : ribD (BDGL_003134)
Accession : YP_004997402.1
Strain : Acinetobacter calcoaceticus PHEA-2
Genome accession: NC_016603
Putative virulence/resistance : Unknown
Product : bifunctional protein ribD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3366343 - 3367428 bp
Length : 1086 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGAGTTGAAACAAGATCAGTATTGGATGCAGCAAGCTATTGAACTGGCCAAACGAGGACTATATTCGACCAAGCC
TAATCCAAATGTTGGTTGTGTGATTGTCAAAGATGATCAGTTAATTGGACAAGGCTTTCATCCTAAAGCAGGTCAACCAC
ACGCTGAAGTTTTTGCCTTACGTGAGGCGGGTGAACATGCACAAGGTGCAACGGCTTATGTCACGCTTGAACCATGTGCG
CATTATGGCAGAACCCCTCCTTGTGCCGAAGCATTGGTGAAAGCTCAAGTTAAAAAAGTAGTGGTTGCTTGTCCTGATCC
AAATCCATTGGTGGCGGGTAAGGGCGTTCAGATTTTGAAAAATGCCGGAATTGAAGTAGAAGTTGGCATTTGTGAAGATT
TAGCATCAAAACTTAATCAAGGTTTTTTAAAGGCAATGTCTACAGGCATACCTTATGTACGTTTAAAGGTAGCCTCAAGT
TTAGATGGGCGTACTGCAATGGCATCAGGTGAGTCGAAGTGGATTACCGGTTCGGCTGCGCGCCAAGATGTACAACATTG
GCGTGCCATTTCTGGAGCAGTGATTACAGGTATTGAAACTGTGATTGCAGATGATTGTCAGCTTAATGTGCGTTCACTCA
ATAATTTTGATATCGAGACAGTTGCTCAGCCAAAACGTGTTGTTTTAGATCGCCAAGGACGTTTACCACTTAACGCTAAG
ATCTTAGAGAATCCTGAAACTGTGATGGTGATGGGGCCGTATCGTCAAGAACTTGCTGATTTAGGCGTGATACAATTAGA
AATTCAGCCTTTAAAAATGCTGTTACAGACCCTATCTAAGCAACATCAAATTTATGATGTGTTGGTTGAAGCTGGCGCAA
CATTGTCTACTGCCTTCTTGCAAGAAGGTTTGGTGGATGAATTGATCAGTTATATTGCCCCGACATTATTGGGGAAAAGT
GCAAGGGCCATGTTCAATGCTGAGTTTGAATATATGGCAGAGCAACTTCGTTTTACACTTCTTGATGTGACACAAATTGA
TCAAGATATACGCTTAAGGTTAATCCCTACGCAAGAGAAAGTATGA

Protein sequence : 
MSELKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFHPKAGQPHAEVFALREAGEHAQGATAYVTLEPCA
HYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGIEVEVGICEDLASKLNQGFLKAMSTGIPYVRLKVASS
LDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIETVIADDCQLNVRSLNNFDIETVAQPKRVVLDRQGRLPLNAK
ILENPETVMVMGPYRQELADLGVIQLEIQPLKMLLQTLSKQHQIYDVLVEAGATLSTAFLQEGLVDELISYIAPTLLGKS
ARAMFNAEFEYMAEQLRFTLLDVTQIDQDIRLRLIPTQEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 9e-156 94
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 9e-156 94