Gene Information

Name : ybbA (BDGL_000266)
Accession : YP_004994534.1
Strain : Acinetobacter calcoaceticus PHEA-2
Genome accession: NC_016603
Putative virulence/resistance : Resistance
Product : putative transport protein (ABC superfamily, ATP-bind)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 287093 - 287785 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence :
ATGCCACAACCCATCATTGCTGCCCATCAAGTTACACAAACTATTCAGATTAACCAAAATCAGTTTACGATTTTAAAAGA
TATTGATTTAGAGATTTTTGAAGGGGAACAGGTAGCAATTACGGGACGTTCCGGCTCAGGTAAATCAACCTTACTAGGAA
TTTTGGCGACTTTAGATCAACCGTCTGAAGGAGAAGTCTGGTTGTGTGGTCAAGCTGTTCATCAGTTAACAGAGGAACAA
CGTGCCCAAATAAGAATGCAGCATATTGGTTTTGTATTTCAGTCTTTTCAACTTCTACCTCAGTTGAGTGCGCTTGAAAA
TGTGATGTTACCTTTACGATTACGTAAAGACTTTGATTATAAAACAGCTGAGAAAAAAGCTTTAGATTGGTTGCATCGAG
TAGGGCTGAGTCGTCAAGTTGAACAAACGCCTAAAGTCTTATCTGGTGGCGAGCAGCAGCGTGTAGCCATTGCACGAGCT
CTTATTGCAGAACCACAAATTATTTTTGCGGATGAACCGACTGGAAACCTAGATGGTCAGACAGCACAAGAAATTGAAAG
CTTGCTCTTTGATTTAAATCGAGAGTTAGGTACGACTCTGATTTTAGTCACCCATGATCGTAATTTAGCATCCCTTTGTC
AGCGTCATGTTGAGTTAGATGATGGCCGACTAAAGACAGTACAGGGTGGTTAA

Protein sequence :
MPQPIIAAHQVTQTIQINQNQFTILKDIDLEIFEGEQVAITGRSGSGKSTLLGILATLDQPSEGEVWLCGQAVHQLTEEQ
RAQIRMQHIGFVFQSFQLLPQLSALENVMLPLRLRKDFDYKTAEKKALDWLHRVGLSRQVEQTPKVLSGGEQQRVAIARA
LIAEPQIIFADEPTGNLDGQTAQEIESLLFDLNRELGTTLILVTHDRNLASLCQRHVELDDGRLKTVQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_004994534.1 putative transport protein (ABC superfamily, ATP-bind) NC_012469.1.7686878. Protein 5e-39 50
ybbA YP_004994534.1 putative transport protein (ABC superfamily, ATP-bind) NC_008702.1.4606598. Protein 4e-34 49
ybbA YP_004994534.1 putative transport protein (ABC superfamily, ATP-bind) CP001581.1.gene798.p Protein 4e-34 43
ybbA YP_004994534.1 putative transport protein (ABC superfamily, ATP-bind) NC_012469.1.7686946. Protein 5e-26 42
ybbA YP_004994534.1 putative transport protein (ABC superfamily, ATP-bind) NC_012469.1.7685735. Protein 2e-31 41