Gene Information

Name : vfu_A00876 (vfu_A00876)
Accession : YP_004992084.1
Strain :
Genome accession: NC_016602
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 894432 - 895340 bp
Length : 909 bp
Strand : +
Note : COG4974

DNA sequence :
GTGTCAGAGCATTTTTCTCCTGATCAAGGGCTGGTGGAACAGTTTCTTGATGCGATGTGGATGGAACGAGGGTTATCGGA
AAACACCCTGATGTCGTACCGCAATGATCTGATGAAGCTGCTAGATTGGATGCAGCGCCACAACTACCGATTGGATTTCA
TCAGCCTGTCAGGCCTGCAAGAATATCAAACTTGGCTGGTGGATCAGGATTACAAACAGACCTCGCGCGCGCGCATGTTG
TCGGCGATTCGTCGCCTGTTTCAGTACCTGCACCGCGAGAAAATGCGTGCCGACGATCCGAGTGCCTTATTGATTAGCCC
CAAATTACCGAAGCGCTTGCCCAAAGATCTCAGCGAAGCCCAAGTGGATGCGCTGCTCAGTGCCCCCAATCCGGACGACC
CGATTGAGCTGCGAGACAAAGCAATGCTAGAGCTGTTATATGCCACGGGCCTGCGTGTGACCGAATTGGTGTCGCTGACG
ATGGAAAACATCAGCCTACGTCAAGGCGTGGTACGCGTGATTGGTAAAGGTGGCAAAGAACGCTTGGTGCCGATGGGCGA
GAATGCCATTGAGTGGATTGAAACTTTTCTGGCGCAAGGTCGGTCTCACCTGTTAGGTGAGCAAACATCGGATGTGGTGT
TTCCAAGCAAGCGAGCGCAACAAATGACGCGCCAAACATTTTGGCATCGCATCAAACATTACGCGGTGATTGCCGGCATT
GATGTCGACAAACTATCGCCGCACGTTTTACGCCACGCGTTTGCCACCCACCTGTTAAACTACGGCGCGGATTTACGCGT
GGTACAAATGCTGCTCGGTCATAGTGACTTATCGACGACGCAAATTTATACTCATGTCGCGACTGAGAGATTGAAACAAC
TACACAGCGAGCACCACCCAAGGGCTTGA

Protein sequence :
MSEHFSPDQGLVEQFLDAMWMERGLSENTLMSYRNDLMKLLDWMQRHNYRLDFISLSGLQEYQTWLVDQDYKQTSRARML
SAIRRLFQYLHREKMRADDPSALLISPKLPKRLPKDLSEAQVDALLSAPNPDDPIELRDKAMLELLYATGLRVTELVSLT
MENISLRQGVVRVIGKGGKERLVPMGENAIEWIETFLAQGRSHLLGEQTSDVVFPSKRAQQMTRQTFWHRIKHYAVIAGI
DVDKLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHSEHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-60 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-60 56