Gene Information

Name : vfu_A00542 (vfu_A00542)
Accession : YP_004991766.1
Strain :
Genome accession: NC_016602
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 562720 - 564831 bp
Length : 2112 bp
Strand : -
Note : COG1200

DNA sequence :
GTGACTCCGTCCATTGGTTATGTGGTTGAATTTATGTCGCAACTTCTTTCAGCAATTCCATTAAGCTCCCTGTCCGGCGT
CGGTGCCAAGGTGGCCGAAAAGCTGGAAAAAATTGGCTTGAACAGCGTTCAAGATTTGCTGTTTCACTTGCCGCTGCGCT
ATGAAGATCGCACGCGCGTCTACCCCATCATCAAACTGCATCCGGGGCTGTGGGCCGCGGTGCAAGGCAAAGTGATGGCG
GTCGACACCACCTTTGGGCGCCGTAAAATGCTGACGGTCAAAATCAGCGATGGCAACGGCACGCTCACGCTGCGTTTTTT
CAACTTCACCGCGGGCATGAAGAACAACTTCGCCGACGGTAAGTTAGTACACGCTTACGGCGAAATTAAACGTGGTAATG
GTGGGCTGGAAATCATCCACCCGGATTACAAGTTTTTCGCGCCGGCGCAAAACCCCGATGTCGAACCCAACTTGACCCCG
GTTTACCCGACCACCGATGGCCTGCGCCAGCTCACGCTGCGTAACCTCACCGATCAAGCGTTGGCGCTGCTCGACAAAGC
CGCAGTGCAAGAGTTACTGCCCTCTGGGCTGTATGACCACCAAATCACCCTCGCTCAAGCGCTGCACACCATTCACCGCC
CACCGGCAGACATTGACTTAAGCCTGTTTGACGAAGGCCGTCATCCGGCGCAGATTCGCCTGATCATGGAAGAGCTGCTG
GCGCAAAACTTGTCGATGCTCGCGGTGCGCAGTAAAGGTCAGCAGGACGTCGCGCTGCCGCTGCCGGAGACTCATCAGCT
CAAACAACAACTGCTGGCACAACTGCCCTTCTCGCCCACCCAAGCGCAAGCGCGCGTGGTGCGTGAAATCGAAGCCGACC
TCGCCAAACCCCACCCGATGATGCGACTGGTGCAAGGCGATGTGGGTTCAGGTAAAACCTTGGTGGCAGCACTGGCGGCC
GTGCGCGCACTCGAACACGGTTATCAGGTTGCGCTGATGGCGCCGACCGAACTCTTGGCTGAGCAGCACGCCCTCAACTT
TGCCAACTGGTTTGAGCGCATGGGCATTCCCGTTGGCTGGCTGGCGGGGAAACTCAAAGGCAAAGCCAAAGAAGCGGAAC
TGGCGCGCATCGCCAGTGGCGAAGTCAAAATGGTGGTCGGGACGCATGCGCTGTTTCAAGAGCATGTGGTGTTTGATCAC
CTGTCGCTGGTGATCATTGATGAGCAGCACCGCTTTGGGGTTCACCAACGTTTAGAACTGCGTGAAAAAGGCGCCAAACA
AGGCGCGTACCCACATCAACTGATCATGACTGCCACGCCGATTCCGCGCACCTTGGCCATGACCGCCTATGCCGATTTGG
AAACCTCCATCATCGACGAATTACCCCCCGGCCGAACGCCGATTCAAACCGTGGCCATTCCCGACACCAAGCGCGCCGAC
ATCATTGAACGCGTGCGTCATGCGTGCCTGACTGAAGGCAAGCAAGCGTATTGGGTCTGCACCCTGATTGATGAGTCCGA
AGTGCTCGAAGCGCAAGCGGCGGCAGACACCGCCGAAGAGCTGCAACGCAAACTGCCAGACCTCAACATTGGTTTGGTGC
ACGGGCGCATGAAACCGGCCGAAAAGCAGGCCGTGATGCAAGCATTTAAAGACAACCAGCTGCATTTATTGGTCGCCACC
ACGGTGATTGAAGTCGGGGTGGATGTACCCAACGCCAGCCTGATGATCATCGAAAACCCAGAACGTTTGGGACTGGCGCA
GTTGCACCAGTTGCGTGGCCGGGTGGGTCGCGGCTCGGTGGCCAGCCATTGTGTCCTGCTCTACCATGCGCCGCTGTCAA
AAACAGCGCAAAAACGACTCGGTGTCCTGCGCGAGAGCAATGATGGCTTCGTGATTGCGCAGCGCGATTTAGAAATTCGC
GGCCCCGGCGAATTGCTGGGCACCAAGCAGACCGGTTTGGCTGATTTCAAAATCGCCGATCTGGTGCGAGACCAACGCCT
GATCCCGGAAGTGCAACGCATCGCCCGCCACATTCACGAACAATACCCCGACAATGCGGTCGCAATCATCGATCGCTGGT
TGGGTGAGCGCGACGTGTACGCCAAAGCCTAA

Protein sequence :
MTPSIGYVVEFMSQLLSAIPLSSLSGVGAKVAEKLEKIGLNSVQDLLFHLPLRYEDRTRVYPIIKLHPGLWAAVQGKVMA
VDTTFGRRKMLTVKISDGNGTLTLRFFNFTAGMKNNFADGKLVHAYGEIKRGNGGLEIIHPDYKFFAPAQNPDVEPNLTP
VYPTTDGLRQLTLRNLTDQALALLDKAAVQELLPSGLYDHQITLAQALHTIHRPPADIDLSLFDEGRHPAQIRLIMEELL
AQNLSMLAVRSKGQQDVALPLPETHQLKQQLLAQLPFSPTQAQARVVREIEADLAKPHPMMRLVQGDVGSGKTLVAALAA
VRALEHGYQVALMAPTELLAEQHALNFANWFERMGIPVGWLAGKLKGKAKEAELARIASGEVKMVVGTHALFQEHVVFDH
LSLVIIDEQHRFGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETSIIDELPPGRTPIQTVAIPDTKRAD
IIERVRHACLTEGKQAYWVCTLIDESEVLEAQAAADTAEELQRKLPDLNIGLVHGRMKPAEKQAVMQAFKDNQLHLLVAT
TVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHAPLSKTAQKRLGVLRESNDGFVIAQRDLEIR
GPGELLGTKQTGLADFKIADLVRDQRLIPEVQRIARHIHEQYPDNAVAIIDRWLGERDVYAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-97 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_A00542 YP_004991766.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 59