Gene Information

Name : vfu_A00368 (vfu_A00368)
Accession : YP_004991602.1
Strain :
Genome accession: NC_016602
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 395305 - 397254 bp
Length : 1950 bp
Strand : +
Note : COG0422

DNA sequence :
ATGTCGAGTCGCAAACAAGCGAGACTGGAAGCCAAACAGTTTATTGAAACCCTCTCGGTACAGCCGTACCCCAATTCAAA
GAAAACCTATCTGACTGGGTCGCGTGACGATATCCGCGTACCAATGCGCGAAATTTCGCTCGCCGACAGCTTGATCGGTG
GTACGAAAGACGCACCCGTCTATGAACCGAACGAAGCGGTGTGTGTGTACGATACTTCAGGTGTATACACCGACCCAGAT
TACACCATCGATCTCTATCAGGGGTTGCCCAAACTGCGTGAACACTGGGTTATGGAGCGCGAGGATACCGAAGTTCTCGA
GGGCATGAGTTCAGCGTACGCGCGTGAACGCCTCGCCGACCAGACTCTGGATGAATTGCGTTATGGCAATCTTCCTGTAA
TTCGCCGTGCGAAAGCTGGTCGTCGTGTGACGCAGTTGCATTATGCCCGTCAGGGGATCATTACACCGGAAATGGAATAC
ATTGCGCTGCGTGAAAATATGGGGCGCCACCACTATCAAGATGAGCAGTTAAACCGCCAACATCCGGGGCAACACTTTGG
TGCTCATTTGCCAAAAGCAATCACCCCTGAATTTGTTCGTCAGGAAGTGGCGGAAGGCCGTGCCATCATTCCATGTAACA
TTAACCACCCCGAATCGGAACCGATGATTATTGGCCGCAATTTCCTCGTGAAGGTCAATGCGAACATTGGTAACTCCTCC
GTGAGTTCGTCGATTGAAGAAGAAGTTGAAAAGCTGGTGTGGGCCACCCGTTGGGGCGGCGATACCGTGATGGATCTGTC
GACCGGACGGAATATTCACGAAACACGAGAATGGATTCTACGCAATAGTCCGGTACCGATTGGGACTGTGCCGATGTATC
AAGCGCTGGAAAAAGTGAACGGTATTGCAGAGAACCTGACTTGGGAAGTGATGCGCGATACGTTGTTAGAACAGGCAGAG
CAGGGGGTGGATTACTTCACCATTCATGCCGGCCTGCTGCTGCGCTACGTGCCGATGACTGCGAAGCGTGTCACTGGCAT
TGTGTCACGCGGTGGTTCGATCATCGCCAAATGGTGTCTGGCTCATCATCAGGAAAACTTCCTTTATACGCACTTCCGCG
AGATCTGTGAGATTTGTGCTAAGTACGATGTGGCGCTGTCATTGGGCGATGGTTTGCGTCCGGGTTCGATTGCTGATGCC
AACGATGAAGCGCAGTTTGCCGAATTGAGAACATTGGGCGAGCTGACTCAAGTGGCGTGGGAATACGACGTGCAAGTGAT
GATTGAAGGCCCAGGACACGTACCCATGCATCTGATCAAAGCCAATATGGACGAGCAGTTGGAACATTGTCATGAAGCGC
CATTTTACACCTTGGGTCCATTGACGACCGATGTCGCGCCGGGTTATGACCACATCACCTCGGGCATTGGTGCTGCGATG
ATCGGTTGGTTTGGTTGTGCCATGTTGTGTTACGTGACACCCAAAGAGCACTTGGGGTTGCCCAACAAAGAAGATGTCAA
AACCGGTCTGATTACCTACAAGCTCGCTGCCCATGCGGCCGATTTGGCCAAAGGGCATCCTGGCGCGCAGATTCGCGACA
ACGCGTTATCGAAAGCGCGTTTTGAATTCCGTTGGGAAGACCAATTCAACCTGTCGCTGGATCCAGTCACGGCGCGCGCA
TTCCATGATGAAACGTTGCCGCAGGAGTCAGGAAAGGTCGCGCACTTCTGTTCGATGTGTGGCCCGAAATTCTGTTCAAT
GAAAATCTCGCAGGAAGTGCGCCGTACATACGCCAATGCTGACAAGATGACTGGTGAAAAATCGGTTGAGGTGAAAGTTC
TCGACGATCCGCTGGAAGGCATGCGTCAGAAATCTGAGGAGTTCTTAGCCACGGGATCGGAACTGTATCACCCCGCGGTT
GCGTCTGCCGAGACGGTGACAGAGGAATAA

Protein sequence :
MSSRKQARLEAKQFIETLSVQPYPNSKKTYLTGSRDDIRVPMREISLADSLIGGTKDAPVYEPNEAVCVYDTSGVYTDPD
YTIDLYQGLPKLREHWVMEREDTEVLEGMSSAYARERLADQTLDELRYGNLPVIRRAKAGRRVTQLHYARQGIITPEMEY
IALRENMGRHHYQDEQLNRQHPGQHFGAHLPKAITPEFVRQEVAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGIAENLTWEVMRDTLLEQAE
QGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLAHHQENFLYTHFREICEICAKYDVALSLGDGLRPGSIADA
NDEAQFAELRTLGELTQVAWEYDVQVMIEGPGHVPMHLIKANMDEQLEHCHEAPFYTLGPLTTDVAPGYDHITSGIGAAM
IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLSLDPVTARA
FHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRRTYANADKMTGEKSVEVKVLDDPLEGMRQKSEEFLATGSELYHPAV
ASAETVTEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 69