Gene Information

Name : vfu_A02981 (vfu_A02981)
Accession : YP_004994103.1
Strain :
Genome accession: NC_016602
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3111441 - 3114002 bp
Length : 2562 bp
Strand : +
Note : COG0249

DNA sequence :
GTGACTGCTGAACAAAAACATACGCCAATGATGCAGCAATACCTCAAGCTCAAAGCTGAGAACCCGGAGATTTTGCTGTT
TTATCGCATGGGCGATTTTTACGAACTGTTCTATGACGATGCCAAACGCGCATCGCAATTGCTGGATATTTCCCTCACCA
AGCGCGGCGCGTCCGCTGGTGAGCCGATTCCGATGGCGGGCGTACCGTTTCATGCGGTCGAAGGCTATTTGGCGAAACTG
GTTCAGTTAGGTGAGTCGGTCGCGATTTGCGAACAGATTGGCGATCCAGCCACCAGTAAAGGTCCGGTTGAACGCAAAGT
CGTACGCATCGTCACGCCGGGCACTGTCACCGATGAAGCGTTGTTGTCAGAACGGGTGGACAACCTGATTGCCGCGATTT
ATCACCATGATGGTCGCTTTGGTTACGCGACATTGGATATTACCTCTGGCCGTTTCCAGTTGTGTGAACCGACATCGGAA
GAAGCGATGGCGGGGGAACTGCAACGCACCTCACCGCGCGAATTGCTGTTTCCTGAAGATTTCGAACCGGTGCAACTGAT
GGCCAGCCGAAAAGGCAACCGCCGCCGCCCGGTGTGGGAATTTGAACTGGATACCGCCAAACAGCAGCTCAATCAGCAGT
TCGGCACCCGTGACTTAGTCGGTTTTGGTGTCGAGCAAGCCAAACTCGGCTTATGCGCCGCGGGTTGTTTGATTCAGTAC
GTGAAAGATACTCAGCGTACTGCCCTGCCACACATTCGTTCACTGACCTTTGATCGCCAAGATCAATCGGTGATTCTGGA
TGCCGCAACCCGTCGTAACCTCGAGTTGACGCAGAACTTAGCCGGCGGCACCGATAACACGCTGGCCGAAGTGTTGGATC
ACTGCGCGACCCCGATGGGCAGTCGTATGCTCAAACGCTGGCTGCATCAACCGATGCGCGGTTTAGATACCTTGAATCAG
CGCCTCGATGCGATTGGGGAATTAAAGCAGCATGCCTTGTTTGCCGAGTTGCATCCGGTGCTCAAACAGATTGGCGACAT
TGAACGCATTCTGGCGCGCCTCGCTCTGCGCTCTGCGCGGCCGCGCGACTTAGCTCGCCTGCGTCATGCGCTGCAGCAAC
TGCCCGAGCTGGCGGATGTGCTCAGCAGTCTAACACTGCCCTATCTGGGTCAATTGCGCGATGACGCGCAACCGATGGAC
AACCTGTGTGAACTACTGGAACAGGCAATCAAAGAAAATCCGCCGGTCGTTATCCGTGATGGTGGCGTGATTGCTGATGG
CTATAACGCAGAGCTAGACGAATGGCGAGATCTGGCCAATGGCGCGACAGAGTACCTCGACAAACTCGAAGCCGACGAAC
GCGAGCGTCATGGCATCGACACCCTCAAAGTCGGCTACAACGCCGTGCACGGCTTCTATATTCAAGTCAGCCGTGGGCAA
AGCCATTTGGTGCCGCCGCATTACGTGCGTCGCCAAACCCTGAAAAATGCCGAGCGCTACATCATTCCGGAATTGAAAGA
GCACGAAGACAAAGTGCTCAATTCAAAATCCAAAGCGCTGGCATTGGAAAAACAGCTATGGGAAGCCCTGTTTGATCAGT
TACTGCCGCATTTAGAACAGATGCAAAATCTGGCATCTGCCCTGTCGCAGATTGACGTGCTGCAAAATCTGGCCGAACGC
GCGGAAAGCCTCGATTACTGCCGTCCAACGCTCAGTGATGAACCGGGGATTCGCATTCAAGCTGGTCGTCATCCAGTGGT
CGAGCAAGTGATGAGCGAACCCTTCATTGCCAACCCGATTGAACTGAATCCGCAACGCAAGATGCTGATCATCACCGGTC
CAAACATGGGCGGTAAATCAACCTACATGCGTCAAACGGCGTTGATTGCGCTGCTTGCGCACATTGGTTCTTACGTGCCA
GCCGAAGCGGCGCAGATCGGTTCGTTGGATCGCATCTTTACGCGTATCGGCGCGTCTGATGATTTGGCCTCGGGTCGTTC
CACTTTCATGGTTGAGATGACAGAAACAGCCAACATTCTTCACAACGCCACCGAACGTAGTTTGGTCTTAATGGATGAAA
TCGGTCGCGGCACCAGCACGTATGATGGCCTGTCATTGGCTTGGGCCAGCGCGGAATGGTTGGCCAAAGAAATTGGAGCC
ATGACACTGTTTGCCACGCACTATTTCGAGCTGACTGAATTGCCAAATGCCTTACCGCATCTGGCGAATGTTCACCTCGA
TGCCGTCGAGCACGGCGATAGCATTGCCTTCATGCATGCTGTGCAAGAAGGCGCAGCCAGCAAATCGTACGGCTTAGCCG
TCGCGGGGTTAGCCGGCGTGCCGAAAGCGGTGATCAAAAATGCTCGTACCAAGTTAACGCAGCTAGAGCAACTGAGCCTG
CAACAACCCAGCAGCAAACCCAACACCGTGGACATTGCCAATCAGCTCAGCTTGATCCCTGAACCCAGCGAAGTGGAACA
AAGCTTGGCCGAGATTGATCCTGACGATCTCACGCCTCGCCAAGCACTTGAAGCGCTCTACCGTCTGAAAAAGATGCTCT
AG

Protein sequence :
MTAEQKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPFHAVEGYLAKL
VQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERVDNLIAAIYHHDGRFGYATLDITSGRFQLCEPTSE
EAMAGELQRTSPRELLFPEDFEPVQLMASRKGNRRRPVWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLIQY
VKDTQRTALPHIRSLTFDRQDQSVILDAATRRNLELTQNLAGGTDNTLAEVLDHCATPMGSRMLKRWLHQPMRGLDTLNQ
RLDAIGELKQHALFAELHPVLKQIGDIERILARLALRSARPRDLARLRHALQQLPELADVLSSLTLPYLGQLRDDAQPMD
NLCELLEQAIKENPPVVIRDGGVIADGYNAELDEWRDLANGATEYLDKLEADERERHGIDTLKVGYNAVHGFYIQVSRGQ
SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKQLWEALFDQLLPHLEQMQNLASALSQIDVLQNLAER
AESLDYCRPTLSDEPGIRIQAGRHPVVEQVMSEPFIANPIELNPQRKMLIITGPNMGGKSTYMRQTALIALLAHIGSYVP
AEAAQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATERSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEIGA
MTLFATHYFELTELPNALPHLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKNARTKLTQLEQLSL
QQPSSKPNTVDIANQLSLIPEPSEVEQSLAEIDPDDLTPRQALEALYRLKKML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_A02981 YP_004994103.1 DNA mismatch repair protein VFG0562 Protein 0.0 73