Gene Information

Name : vfu_A01483 (vfu_A01483)
Accession : YP_004992669.1
Strain :
Genome accession: NC_016602
Putative virulence/resistance : Virulence
Product : ferric vibriobactin ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1540905 - 1541711 bp
Length : 807 bp
Strand : +
Note : COG1120

DNA sequence : 
ATGAACACCGAAGTTGAAGCGCGCCTGACGGGCAGTAACCTGCGATTAGGCTACGAAGGGTACACCGTGTTCGATGGCAT
TGATGTGCGCATTCCCGATGGTAAGTTTACCGTCGTCGTTGGCCCCAATGGCTGCGGAAAATCGACCTTACTGCGCACGC
TGTGCCGCTTACTCAAACCCAAAGCAGGGCAGGTCTGCCTCGATGGACATGACATTCATGGGCTACCGACCAAAGCGCTG
GCACGCCAGTTAGGACTGTTGCCGCAAAGCGCCACGGCGCCCGATGGCATTCGCGTGGTCGATTTGGTGGCGCGCGGGCG
TTATCCGCATCAGGAACTGTTTCGCCAATGGAGTCTCGACGATGAACGCGCGGTACGCTCGGCCATGCAGGTGACGGGCA
TTGACGCGCTGGCCGAACGCCAAGTGGATGAACTTTCGGGCGGTCAACGTCAGCGGGTGTGGATTGCGATGGTGCTTGCG
CAGCAAACACCGCTGCTGCTGCTCGATGAGCCGACGACGTATCTCGACATCGCTCATCAGATTGAGTTGCTGGAACTGTT
CCGCGATCTCAACCGCAACAGCGGTCACACGCTGATCGCGGTACTGCACGACCTCAATCAGGCGTGTCGTTATGCCGACC
ACATGATTGCCATGGCACATGGCAAGATCATCGCGGAAGGCAATCCGAGTGAACTGATCAATGCGGATTTGGTGCGTGAC
GTGTTTGACCTGGAAAGCGTGATCATTGAAGATCCGGTCAGCCACACGCCGCTGGTGATTCCGCGCGGTCGCAAACGGCA
TGAATGA

Protein sequence : 
MNTEVEARLTGSNLRLGYEGYTVFDGIDVRIPDGKFTVVVGPNGCGKSTLLRTLCRLLKPKAGQVCLDGHDIHGLPTKAL
ARQLGLLPQSATAPDGIRVVDLVARGRYPHQELFRQWSLDDERAVRSAMQVTGIDALAERQVDELSGGQRQRVWIAMVLA
QQTPLLLLDEPTTYLDIAHQIELLELFRDLNRNSGHTLIAVLHDLNQACRYADHMIAMAHGKIIAEGNPSELINADLVRD
VFDLESVIIEDPVSHTPLVIPRGRKRHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-62 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-53 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-63 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-63 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-65 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-65 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-65 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-65 49
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_A01483 YP_004992669.1 ferric vibriobactin ABC transporter, ATP-binding protein BAC0164 Protein 6e-54 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_A01483 YP_004992669.1 ferric vibriobactin ABC transporter, ATP-binding protein VFG0925 Protein 1e-79 61
vfu_A01483 YP_004992669.1 ferric vibriobactin ABC transporter, ATP-binding protein VFG1042 Protein 6e-54 49