Gene Information

Name : vfu_A01468 (vfu_A01468)
Accession : YP_004992655.1
Strain :
Genome accession: NC_016602
Putative virulence/resistance : Virulence
Product : vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1518818 - 1520437 bp
Length : 1620 bp
Strand : -
Note : COG1021; COG0365

DNA sequence : 
ATGAACGCACAACGAGAATTAGATTACACCCCTTGGCCGCAGGAACTGGCCGACCACTACCGCGCGCTGGGATACTGGCA
AGATAAAACGCTGTTGGATTACCTACTGGAAACTGAAGCCAAGTTTTCGCAGCGTGAGGCCATTGTGTGCGGCCAACGCG
CGATCAGCTATCGCGAACTGGTCGACAGCGCGGCGCAACTGGCGGCGGGATTTCGTCAGCTCGGTTTACAGCGCGGCGAC
AACGTCGTGTTGCAAATGACCAACATTGCCGAGTTTTATCAGTGCTTCTTCGCCCTGTTGCAAATTGGCGTGCGCCCGGT
GCTTACGCTGCCCGCCCATCGCCAAATGGAAATCAGCTACTTCTGCCAACACGCCGATGCCAAAGCGTATCTGATTGATG
GCGAAGCGAGCAGCTTCAATTATCAAGCATTGGCAAGCGACATCGTGGCGCAGTGCCCGACCATTGAACATGTGATTGTT
CGCGGCCAAGTCACGGTGGACGACCCTCGGTTCGTGGCGCTTGATGACTGCTTGCAACCTGCACTACAAGAACAAGATGC
CGATGCCAGTGAGGTCGCGTTTTTCCAGCTGTCGGGCGGCACCACAGGCACACCGAAACTGATTCCGCGCACGCACAATG
ATTACGCCTACAGTGTCACCGGCAGTGTGGAAATTTGTCATTTCGACCATATGACGCGCTTTTTGTGCGCGCTGCCAGTC
GCGCATAACTTTCCACTCAGCTCTCCGGGCGCGTTGGGCGTGTTCTGGGCAGGTGGCTGCGTGATTCCCACCCAAGATCC
AACGCCACAACATGCGTTTGAGATGATTGAGCGTCACCGTGTTACCGTCTCTGCACTGGTGCCGCCACTGGCGCTGCTGT
GGATGGATTACGCCGAGAAAGCCACGCACGACATTTCCAGCTTGGAACTGCTGCTGGTTGGCGGCGCTAAGTTTAGCGAA
ACGGCGGCGCGTGAGCTGCCAAGTCGACTGCACTGCCGCCTGCAACAGGTGTTTGGCATGGCGGAAGGTTTGGTGAACTA
CACTCGGTTTGACGACAGCGATGAGGTGATTGCAAGCACCCAAGGCCGCCCAATTTCACCGCACGATCAAGTGCGCGTGG
TCGATGAGGACGGGAACGATGTCGCCGTCGGCGAAGAGGGATTTCTGCTCACGCAAGGGCCGTACACCATTCGCGGCTAT
TATCGCGCGCCAGCGCACAACGAACGTTCGTTTACCCCAGACGGCTTTTATCGCACTGGCGATCTGGTCAAGCGCACCGC
AGCAGGCAACATCATCGTGACCGGGCGCGACAAGGATCAGATTAACCGCGGCGGTGAAAAAATCGCGGCAGAAGAGATTG
AAAACTATCTGCTTCGCCACGAAGCAGTGCATGACGCGGCGCTGGTGGCGGTGCCGGATGATTACTTGGGCGAGCGTAGC
TGCGCGGTAATCGTCAAGCGCGAAGGGCATCAGGTGAAAGGATTGGCGCTGAAACGCTTTCTGCGTGATTTAGGCTTGGC
GGATTTCAAGCTGCCGGATCAAATCCAATTCATCGACGTGTTGCCAAAAACCTCCGTCGGCAAAGTCGACAAAAAAGGAC
TGCGCGCGCTGTATAGCTAA

Protein sequence : 
MNAQRELDYTPWPQELADHYRALGYWQDKTLLDYLLETEAKFSQREAIVCGQRAISYRELVDSAAQLAAGFRQLGLQRGD
NVVLQMTNIAEFYQCFFALLQIGVRPVLTLPAHRQMEISYFCQHADAKAYLIDGEASSFNYQALASDIVAQCPTIEHVIV
RGQVTVDDPRFVALDDCLQPALQEQDADASEVAFFQLSGGTTGTPKLIPRTHNDYAYSVTGSVEICHFDHMTRFLCALPV
AHNFPLSSPGALGVFWAGGCVIPTQDPTPQHAFEMIERHRVTVSALVPPLALLWMDYAEKATHDISSLELLLVGGAKFSE
TAARELPSRLHCRLQQVFGMAEGLVNYTRFDDSDEVIASTQGRPISPHDQVRVVDEDGNDVAVGEEGFLLTQGPYTIRGY
YRAPAHNERSFTPDGFYRTGDLVKRTAAGNIIVTGRDKDQINRGGEKIAAEEIENYLLRHEAVHDAALVAVPDDYLGERS
CAVIVKREGHQVKGLALKRFLRDLGLADFKLPDQIQFIDVLPKTSVGKVDKKGLRALYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 8e-98 47
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 1e-97 47
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 4e-99 47
ybtE CAA21394.1 - Virulence HPI Protein 4e-99 47
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 3e-99 47
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 5e-99 47
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 4e-99 47
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 4e-99 47
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 4e-99 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vfu_A01468 YP_004992655.1 vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase VFG0932 Protein 1e-118 50
vfu_A01468 YP_004992655.1 vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase VFG0168 Protein 9e-120 49
vfu_A01468 YP_004992655.1 vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase VFG1817 Protein 2e-101 44