Gene Information

Name : vfu_A01059 (vfu_A01059)
Accession : YP_004992261.1
Strain :
Genome accession: NC_016602
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1106129 - 1107238 bp
Length : 1110 bp
Strand : +
Note : COG0117; COG1985

DNA sequence :
ATGCCTACATTTACCTCTTTTGATTATCAAATGATGTCCCGTGCGATCAAACTGGCGCAGCGTGGACGTTTTACCACTGC
CCCCAATCCCAATGTCGGTTGCGTGATCACGCAAGGCGAGTCCATTGTCGGGGAAGGGTTTCACTTTCGCGCTGGCGAAC
CGCATGCAGAAGTACATGCCTTGCGTATGGCGGGCGAGCAATCGGTGGGCGCCACCGCATATGTGACGCTTGAGCCGTGC
TCTCATTACGGGCGTACCCCGCCGTGTGCCGAAGGCTTGATTAAAGCCGGTGTCGCGCGCGTGATCTGCGCGATGCAAGA
CCCAAATCCACAGGTGGCCGGGCGGGGCATTGACATGCTGCGCGAAGCGGGCATTGAGGTGCAGGTCGGTTTATTGGAAG
CCGATGCACTGGCACTGAATCCGGCGTTTATCAAACGCATGAAAACCGGCATGCCATGGGTGCAACTGAAAATGGCGGCA
AGCCTTGATGGTCAAACGGCATTGGCCAATGGCCGCAGCCAATGGATTACATCACCACAGGCGCGTCAAGATGTGCAGGC
TTATCGCGCGCAAGCTGGCGCGGTGCTATCAACCAGCCAAACGGTGTTAGCCGACAACGCCTCTTTGACGGTGCGTTGGC
AGGACTTACCGGCACATGTTCAAGCAACATACGCTGAACAACATCTGCGCCAACCGGTGCGCGCCATTCTCGATCGTCAG
CATCAATTGCACCGTGAACTGACCCTGTATGCAACGGACAGTGCTGTGCTCCGTGTGGCGAATCAGGATGCCGATGTGTG
TGTCGCGCTTGATGAACAAGGCCAGTTGAATTTGCGCGAAGTCTTGGGAGCGTTAGCCAAACACCACAATATCAACCATA
TTTGGGTCGAAGCCGGCGCCACTTTGGCGAAGTCGCTGCTGGAACAAGACTTGGTGGATGAACTGGTTGTGTACCTAGCA
CCCAAAATCATGGGCAGCGACGGACGCGGCCTGTTTGGGGCGTTGGGACTGACGGACATGCAGCAGGTTTTGGCGTTGAG
CATTCAAGATTGCCGAATGGTCGGCCCGGATATTCGCGTCGTGGCGACGCTTGAACGGAAAGATAACTGA

Protein sequence :
MPTFTSFDYQMMSRAIKLAQRGRFTTAPNPNVGCVITQGESIVGEGFHFRAGEPHAEVHALRMAGEQSVGATAYVTLEPC
SHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGIDMLREAGIEVQVGLLEADALALNPAFIKRMKTGMPWVQLKMAA
SLDGQTALANGRSQWITSPQARQDVQAYRAQAGAVLSTSQTVLADNASLTVRWQDLPAHVQATYAEQHLRQPVRAILDRQ
HQLHRELTLYATDSAVLRVANQDADVCVALDEQGQLNLREVLGALAKHHNINHIWVEAGATLAKSLLEQDLVDELVVYLA
PKIMGSDGRGLFGALGLTDMQQVLALSIQDCRMVGPDIRVVATLERKDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-58 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-58 47