Gene Information

Name : Oweho_0836 (Oweho_0836)
Accession : YP_004988494.1
Strain : Owenweeksia hongkongensis DSM 17368
Genome accession: NC_016599
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 892661 - 895207 bp
Length : 2547 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif

DNA sequence :
ATGGACGAAAACTTTTCACCCCGAGTAAAAGACGTGATCAGCTATAGCAAAGAAGAAGCTATACGACTGGGACACGACTA
CATAGGTACTGAACATTTGATGCTTGGATTGATTCGTGAAGGTGAAGGTAGTGCCATCCAGATTTTAGAAGATCTGGGTG
TAGATGTACCCGCTTTCCGAAGAAAAATAGAGGCCATTAGCGCCCCCAATATCTCAGGTCAAATAAATACAAAGAAGAAC
CTACCGCTTACAAGACAAGCGGAAAAAGCACTGAAAACCACGTTTTTAGAAGCTAAACTTTTTCAAAGCAATCAAATTCG
CACCTCGCACCTTTTGCTGTGTATACTGCGCAATGACGATGATCCTGTGTCCCGAATTTTGAGACATTATGAAATTAATT
ACGATAACGTAAAAACAGAGTATCAATCGCATTATGCTGATGAACTAAAAGATAAACCGCGTGCCGAAATGTCTTATGGT
GAAGATGATGATGACTTTGAACGTAAAGACCCTGGCTACACTGGTGGTAAAGGAAAAACTGAAACAAAAACCAAGACTCC
TGTTTTGGATAACTTTGGTAGAGACCTTACCAAATTGGCAGAAGATGGAAAACTTGATCCCGTAGTGGGAAGAGAAAAAG
AGATTGAGCGTGTTTCTCAAATTCTTTCTCGTAGAAAGAAAAACAACCCCCTACTTATTGGTGAGCCTGGTGTTGGTAAA
TCTGCAATAGCAGAAGGACTAGCCTTGCGCATTGTGAAGAGAAAAGTATCTCGTGTACTTTTTGACAAGCGTGTAGTTAC
TTTAGATCTTGCTTCATTAGTAGCAGGAACAAAATACCGAGGCCAATTTGAAGAGCGTATGAAAGCTTTGATGAATGAGT
TGGAGAAAAACGAAAACATCATTTTATTCATTGATGAACTTCACACAATTGTAGGTGCCGGTGGTGCTACTGGATCTTTG
GATGCCAGCAATATGTTTAAGCCAGCTCTTGCACGTGGAGAAATTCAATGCATTGGAGCTACTACGCTTGACGAATACCG
TCAATATATTGAGAAAGATGGTGCTCTGGAAAGGCGTTTCCAAAAAGTGATGGTAGATCCTACCACCCCTGATGAAACGA
TTCAGATCCTTAATAATATTAAGGATAAATACGAAGATCACCACAACGTAATTTATACTGAAGAAGCTATCAAAGCTTGC
GTGGCTCTTACTTCTCGTTATATCAGCGATCGTCATTTGCCGGATAAGGCAATTGATGCATTGGATGAGGCTGGATCAAG
AGTTCATATTACAAGCATTCATGTTCCTAAGGATGTAATGGAGCTTGAGAAAAAACTTGAAGAGATTCGCGAGCAGAAGA
TTCAGGTGGTGAAGAAACAGCGCTATGAAGAAGCTGCTAAACTTCGAGATGATGAAAAGCGTGTGGAAGGTCAACTTCAA
GATGCTCAGGCTGCCTGGGAAGAAGAAGTGAAGAAGAACCGCGAAACTGTAGATGAGCCGGATGTAGCCGAAGTTGTAGC
TATGATGACAGGTATTCCTGTACAGCGTGTGGCGCAGCATGAGAGCAATCGCCTTACCGGAATGGGCAAGGAAATGAAAA
GCCAAATTATCGGTCAGGATGATGCGGTAGATAAGATTGTGAAAGCTATTCAGCGTAACCGTGCAGGATTGAAAGATCCG
AATAAACCGATTGGTTCGTTCATCTTTTTAGGGCCTACTGGAGTTGGTAAAACTCAGCTTGCAAAGGAGCTTTCTAAAAG
CTTATTTGACAGCGAAGATAATCTCATTCGAATTGATATGAGTGAGTACATGGAGAAATTTGCCATTTCAAGATTGGTAG
GAGCGCCTCCCGGATACGTAGGATATGAAGAAGGCGGACAGCTTACTGAAAAGGTGCGCAGAAAACCTTATTCTGTAGTT
CTTTTGGATGAGATTGAAAAAGCTCACCCGGATGTGTTTAACTTATTGCTACAAGCTCTGGATGATGGACATATGACGGA
TAGCTTGGGTCGCAAAGTTGACTTTAAGAATACCATCATTATTATGACTTCTAACATCGGTACCCGCCAGTTGAAGGACT
TTGGTGGCGGTGTAGGATTTGGCACAGCGGCTAAAACTTCTAACCCAAGTGATGTGGCCAAGGGTGTAATTGAAACCGCT
CTTAAGCGTGCTTTTGCCCCTGAATTCTTGAACCGTATTGATGATGTAATTCTGTTCAACAGCCTTAGCAAAAAAGATAT
CCTTAAGATTATCGATATCGAATTGGTAAAGCTTTACAAGCGTATTGAAGGACTTGGATACAATGTAAAAATGAGTACCA
AGGCCAAGGAATATATTGCTGACAAAGGCTTTGACGAGAAGTTTGGTGCGCGCCCACTGGCACGCGCTATTCAGAAATAT
GTTGAAGATCCATTAGCAGAGCAAATCATAAACTCTGAAGTGGAAGAAGGTGATGAAATCTTTATCGACCTTAAGAAAGG
TAAGGATGAGCAAGAAATCACCGTTACTATAAATAAGAAAACAGAAAAGGCTGAAGACGAATCATAG

Protein sequence :
MDENFSPRVKDVISYSKEEAIRLGHDYIGTEHLMLGLIREGEGSAIQILEDLGVDVPAFRRKIEAISAPNISGQINTKKN
LPLTRQAEKALKTTFLEAKLFQSNQIRTSHLLLCILRNDDDPVSRILRHYEINYDNVKTEYQSHYADELKDKPRAEMSYG
EDDDDFERKDPGYTGGKGKTETKTKTPVLDNFGRDLTKLAEDGKLDPVVGREKEIERVSQILSRRKKNNPLLIGEPGVGK
SAIAEGLALRIVKRKVSRVLFDKRVVTLDLASLVAGTKYRGQFEERMKALMNELEKNENIILFIDELHTIVGAGGATGSL
DASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVMVDPTTPDETIQILNNIKDKYEDHHNVIYTEEAIKAC
VALTSRYISDRHLPDKAIDALDEAGSRVHITSIHVPKDVMELEKKLEEIREQKIQVVKKQRYEEAAKLRDDEKRVEGQLQ
DAQAAWEEEVKKNRETVDEPDVAEVVAMMTGIPVQRVAQHESNRLTGMGKEMKSQIIGQDDAVDKIVKAIQRNRAGLKDP
NKPIGSFIFLGPTGVGKTQLAKELSKSLFDSEDNLIRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKPYSVV
LLDEIEKAHPDVFNLLLQALDDGHMTDSLGRKVDFKNTIIIMTSNIGTRQLKDFGGGVGFGTAAKTSNPSDVAKGVIETA
LKRAFAPEFLNRIDDVILFNSLSKKDILKIIDIELVKLYKRIEGLGYNVKMSTKAKEYIADKGFDEKFGARPLARAIQKY
VEDPLAEQIINSEVEEGDEIFIDLKKGKDEQEITVTINKKTEKAEDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-174 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oweho_0836 YP_004988494.1 chaperone ATPase VFG0080 Protein 2e-149 51
Oweho_0836 YP_004988494.1 chaperone ATPase VFG0079 Protein 0.0 50