Gene Information

Name : Oweho_3304 (Oweho_3304)
Accession : YP_004990900.1
Strain : Owenweeksia hongkongensis DSM 17368
Genome accession: NC_016599
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3707001 - 3707993 bp
Length : 993 bp
Strand : +
Note : PFAM: NAD dependent epimerase/dehydratase family

DNA sequence : 
ATGTTTGACCAACCGTATCACGAGGGTTCATTAGCAGATAAATCATTTTTAATTACCGGAGGAGCTGGATTTATAGGCTC
CAATATAGTAGAGTATTTGCTAAAATACGGAGCTTCAAAAGTGAGGGTGCTTGATAATTTATCGAATGGTTACTATACCA
ACATCGAGGAATTTGAAACTAACCCGGCATTTGAATTTGTAGAAGGAGATATCCGAGATTTAGAAACCTGTAAAAAAGCC
TTGGTTGGGATTGATTATGTTTCTCATCAAGCCGCATTGGGTTCTGTTCCGCGTTCAATTGAAGATCCAATCAATACTAA
TTCGGTAAACATTGATGGCTTTCTTAATATGCTAACGGCTGTTAAGGATAGTGATGGGATCAAGCGAATGGTATATGCAG
CCAGTTCATCTAGCTATGGTGATAGCCCTGCCTTGCCAAAGGTAGAGGGAAATGAAGGTAACCCACTTTCGCCCTATGCG
GTTACTAAATGGGTTAATGAATTATACGCTGATGTATATAGCAAGGTATATGGACTCCATACTGTAGGTCTTAGATACTT
CAATATTTTTGGTCCCCGTCAAAACCCAGATAATCCTTATGCGGCTGTAATTCCACTGTTTATGAAAGCTGCTATAGATG
GTGTAGCCCCAAAGATGAATGGTGACGGTGAAACTTCACGAGACTTTACTTTTGTTGAAAATGCTGTGCAAGCTAATGTA
AAAGCAATGCTGAACACGGAGAACTTGGATCAGCATGAAGCTTGTAATATTGCGGTTGGAGATAGAACTACACTCAATCA
ACTTTGGGATGGAATTGCCAAGGCGGCAGATACTGACCTGAGCCCAGTGTATGGCCCTGAGCGCCCTGGAGATGTAAAGC
ATAGCCTGGCCGATATATCCAAGGCAAAAACCATTTTAGGTTATAATCCAAAGTTTAGAATTGATGATGGTCTCAAAATA
GCTTTTGATTATTACAAACAGAACTTTGGCTAA

Protein sequence : 
MFDQPYHEGSLADKSFLITGGAGFIGSNIVEYLLKYGASKVRVLDNLSNGYYTNIEEFETNPAFEFVEGDIRDLETCKKA
LVGIDYVSHQAALGSVPRSIEDPINTNSVNIDGFLNMLTAVKDSDGIKRMVYAASSSSYGDSPALPKVEGNEGNPLSPYA
VTKWVNELYADVYSKVYGLHTVGLRYFNIFGPRQNPDNPYAAVIPLFMKAAIDGVAPKMNGDGETSRDFTFVENAVQANV
KAMLNTENLDQHEACNIAVGDRTTLNQLWDGIAKAADTDLSPVYGPERPGDVKHSLADISKAKTILGYNPKFRIDDGLKI
AFDYYKQNFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-66 51
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-66 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oweho_3304 YP_004990900.1 nucleoside-diphosphate-sugar epimerase VFG0430 Protein 5e-67 51