Gene Information

Name : Oweho_3303 (Oweho_3303)
Accession : YP_004990899.1
Strain : Owenweeksia hongkongensis DSM 17368
Genome accession: NC_016599
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3705676 - 3706980 bp
Length : 1305 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGAATCTTTCGGATAAAAAAATTGCAGTAATTGGCTTAGGCTATGTCGGACTCCCTTTAGCAGTGGAGTTTGGTAAAAA
ATTTCCAACTGTAGGTTTTGATATTAATACTGTAAGAATTGATCAGCTTCAAAAAGGTGAAGATGTCACTTTGGAGGTGG
AAAATGAATATCTTAAATCCGTTGTTGTGGATAACCCCATGGCTATAAACAACAGAGGACTGTACTGTACATCTTCTATA
GGTGACATGTCAGATTGCAATGTTTTTATAGTTACAGTGCCTACGCCAACTGATAAATATAATCGTCCAGTATTGACACC
TTTGGTTAAGTCTAGCGAAACCGTGGCAGCGGTATTGAAAAAAGGAGATATAGTAATTTACGAATCAACTGTATATCCAG
GGGTTACTGAGGATGAATGTGTTCCGGTATTAGAGGCCAATTCGGGATTAAAATATAACGAAGATTTTTTTGTAGGCTAC
TCTCCTGAAAGAATTAATCCGGGAGATAAGGAGCATACGGTAACTAAAATATTAAAAGTTACTTCCGGAAGTACTCCTGA
AATTGCAGATGTAGTAGATGCTATTTATCGCGAAGTAATTATTGCTGGTACGCATAAGGCGCCAAGTATAAAAGTAGCTG
AAGCAGCTAAGGTAATTGAGAATAGTCAGCGAGATATTAACATTGCCTTTGTAAATGAATTAAGCAAAATATTTAACCGC
TTGGGTATTGATACCTTAGAGGTATTGGAGGCAGCTGGTACGAAGTGGAACTTTCTTCCATTTAAACCAGGTCTTGTAGG
TGGTCATTGTATTGGTGTGGATCCTTATTATTTGGCACAAAAGGCTCAAGAGGTGGGGTATCACCCTGAGATTATTTTAG
CTGGTCGTAGACTGAATGATGGAATGGGAGCCTATGTGGCCACTGAAGTGGTTAAGTGTATGCTAAAGAAAGACATTGCC
ATTACCAGTTCTAAAGTATTAATGCTCGGAATCACATTCAAAGAAAACTGCCCTGATATTAGAAACTCCAGAGCTATTGA
CATTATCAATGAGTTGAAGACTTATGATATACAAGTAGACGTGTTTGACCCTTGGGCTAATGAGGAAGAAGTGAAGCACG
AATATGGAATTGATTTGATTACAAGTTTCGAAGCTTTGGATAAAGCTTCTTATGATGGAGTTGTGTTAGGTGTAGCCCAT
AACTCTTATTTGGAGCTGGATATTGCAGGACTTAGAAAGGAGAACAGCGTAATGTATGATGTAAAGGGCATTTGGCCCAA
AGATCAGATAGACGCAAGATTATAA

Protein sequence :
MNLSDKKIAVIGLGYVGLPLAVEFGKKFPTVGFDINTVRIDQLQKGEDVTLEVENEYLKSVVVDNPMAINNRGLYCTSSI
GDMSDCNVFIVTVPTPTDKYNRPVLTPLVKSSETVAAVLKKGDIVIYESTVYPGVTEDECVPVLEANSGLKYNEDFFVGY
SPERINPGDKEHTVTKILKVTSGSTPEIADVVDAIYREVIIAGTHKAPSIKVAEAAKVIENSQRDINIAFVNELSKIFNR
LGIDTLEVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEVGYHPEIILAGRRLNDGMGAYVATEVVKCMLKKDIA
ITSSKVLMLGITFKENCPDIRNSRAIDIINELKTYDIQVDVFDPWANEEEVKHEYGIDLITSFEALDKASYDGVVLGVAH
NSYLELDIAGLRKENSVMYDVKGIWPKDQIDARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-122 57
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-122 57
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-106 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oweho_3303 YP_004990899.1 nucleotide sugar dehydrogenase VFG0431 Protein 7e-123 57