Gene Information

Name : Oweho_2220 (Oweho_2220)
Accession : YP_004989839.1
Strain : Owenweeksia hongkongensis DSM 17368
Genome accession: NC_016599
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2484000 - 2485724 bp
Length : 1725 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGAGCCAACATTTATCAGAACAGGAAATTCAAAGACGCGAATCGTTAAAAAAACTTCGCGACTTGGGCATTGAGCCTTA
TCCTGCAGCCGAGTATCATATTACCCACACCACCGAGCAAATCAAAGCTCAATATCCAGAAAACAAGGAAGACGAGGCGT
TTAAGTCTGTGTCTTTGGCTGGCCGCCTTATGAGCGTTCGCGTGATGGGAAAGGCATCTTTTGCCAACCTTCAGGATGCA
TCGGGTCGCGTGCAGGTTTATTTCAACCGTGATGTAATCTGTCCCGGAGAAGATAAATCGCTCTACAATGACGTATTCAA
AAAGTTGCTGGACATCGGTGACTTTATCGGTATAAAAGGAAAAGTATTTACCACACAGGTTGGAGAAACTACCATTGAGG
TAGAATCCTTTACTGTGCTGAGCAAAGCTTTAAAGCCTCTTCCAGTTGTAAAAACTGATGATCAGGGTAATGTGCATGAC
CGTTTTAACGACCCTGAAATGCGCTACCGCATGCGCTATGTTGACCTAGTGGTAAATGATGGTGTGAAAGAAACCTTTGT
GAAACGCACCAAAATCATGAATGCCATGCGCGAGTTTTTCAACGCCAAAGACTATTTGGAAGTTGAAACTCCAATACTAC
AGCCTATCCCTGGGGGAGCTGCTGCTCGTCCGTTTATTACGCATCACAATGCGCTGGACATGCCTCTTTATCTGCGTATT
GCCAATGAGCTTTACCTAAAAAGACTGATTGTTGGTGGTTTTGATGGTGTGTATGAATTTGCAAAAGACTTCAGAAATGA
AGGAATGGACCGCACGCACAATCCGGAGTTTACCGTGATGGAAATTTACGTTGCCTATAAGGACTACTTCTGGATGATGG
ACTTTACCGAAAAGATGCTGGAGCACGTGGTGAAAACCGTAAATGGTGCCACAACGGTGAAAATTGGAGATAAAGAAATT
AGCTTCAAAGCTCCGTTTAAGCGTATTAGCATGATTGATGCAATTAAGGAACATACCGGCATCGACATCAACGGAATGGA
CGAAAAGGAACTACTTGAAGTTTGTAAAAAACTACATGTGGAGACTGACGAAACCATGGGTAAAGGAAAATTGATAGATG
AAATTTTTGGTGAAAAATGTGAGCCTCATTACATCCAGCCAACTTTCATTACCGATTACCCTGTAGAAATGTCGCCACTG
TGCAAAAAGCATCGTGACAACCCAGAGCTTACTGAGCGCTTTGAACTGATGATAAATGGTAAAGAGGTAGCCAATGCTTA
CTCTGAGCTAAACGACCCGATTGATCAACGTGAGCGTTTTGAAGCGCAGCTTACACTTTCTGAAAAAGGAGATGACGAAG
CGATGTTTATCGATCAGGATTTCCTTAGGGCTTTGGAATACGGAATGCCTCCGACATCGGGTATGGGCATCGGTATAGAC
CGTTTGACTATGCTCCTTACAGGACAAACTTCTATTCAGGAAGTCCTTTTCTTCCCACAGATGCGTCCAGAGAAAAAACC
AGTTCTTCCTAAGAAAGAAGACTTTGAAAAAGTTGGTGTTTCTAAAGAATGGAGCGCACATGTTATGGAAGTTTTTGGTA
ATGTAAAAAAACTACAAGAAGCGAAAGCCACTCAAGTTCACCAGCAATTGAACGGATACCGCAAAAAGAAAAAGCTGGAC
ATTCCTGCTTTACAATTGCCAGATGTAGAAAATTGGTTTGAATAA

Protein sequence :
MSQHLSEQEIQRRESLKKLRDLGIEPYPAAEYHITHTTEQIKAQYPENKEDEAFKSVSLAGRLMSVRVMGKASFANLQDA
SGRVQVYFNRDVICPGEDKSLYNDVFKKLLDIGDFIGIKGKVFTTQVGETTIEVESFTVLSKALKPLPVVKTDDQGNVHD
RFNDPEMRYRMRYVDLVVNDGVKETFVKRTKIMNAMREFFNAKDYLEVETPILQPIPGGAAARPFITHHNALDMPLYLRI
ANELYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNPEFTVMEIYVAYKDYFWMMDFTEKMLEHVVKTVNGATTVKIGDKEI
SFKAPFKRISMIDAIKEHTGIDINGMDEKELLEVCKKLHVETDETMGKGKLIDEIFGEKCEPHYIQPTFITDYPVEMSPL
CKKHRDNPELTERFELMINGKEVANAYSELNDPIDQRERFEAQLTLSEKGDDEAMFIDQDFLRALEYGMPPTSGMGIGID
RLTMLLTGQTSIQEVLFFPQMRPEKKPVLPKKEDFEKVGVSKEWSAHVMEVFGNVKKLQEAKATQVHQQLNGYRKKKKLD
IPALQLPDVENWFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-104 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oweho_2220 YP_004989839.1 lysyl-tRNA synthetase VFG1668 Protein 5e-104 44