Gene Information

Name : AZOBR_p60035 (AZOBR_p60035)
Accession : YP_004987579.1
Strain :
Genome accession: NC_016597
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase family protein; putative Capsular polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 50122 - 51414 bp
Length : 1293 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 7961465; Product type e : enzyme

DNA sequence :
ATGACCCATTCCCGCCGCATCTCGGTGATCGGACTCGGTTACGTCGGTCTGCCCGTGGCCGTTGCGTTTGGGCGGATGGA
CGTCCCCGTCGTCGCCTTCGACATCGACGCGCGGCGCATCGCGGCGCTTCGGGCTGGGCACGACCACACGGGCGAGGTGG
CGGACACGGATCTGGCGGCGGCCAGGCTCCACCTGACCGACGACCCGGCGGATCTGGCGCAGGCGGACTTCCACATCGTC
ACCGTGCCGACCCCTATCGACGACGCCCGGCGCCCGGACCTGCGCCCGCTGCTGGCCGCCAGCCGTACCGTCGGGCGGCA
TCTGAAGCGTGGCGACGTGGTGGTCTACGAATCCACGGTCTATCCCGGCGCCACGGAGATGGACTGCGTGCCGGTGCTGG
AGGCGGAATCGGGCCTCACCTTCGGGCGGGATTTCACCATCGGCTATTCGCCGGAGCGTATCAACCCCGGCGACAAGGAA
CACCGGTTCGAGACGATCACTAAGGTGGTCTCCGGCTCCGATCCGGCGACGCGGTCGCTCGTCGCGGCGGTCTATGGCAG
CGTGGTCAAGGCCGGCGTGCACGAGGCCGCCTCCCTCGCCGTGGCGGAGGCCGCCAAGGTGATCGAGAACACCCAGCGCG
ACGTCAACATCGCCCTGATGAACGAACTGGCGGTGATTTTCCACCGCATGGGCATCGACACCCGCGACGTGCTGGCCGCC
GCTGGCACCAAGTGGAATTTCCTGAAGTTCCAGCCGGGCCTCGTCGGTGGCCACTGCATCGGCGTCGACCCCTACTATCT
GACCCACCGGGCGGAACAACTCGGCCACAACCCGGAAGTCATCCTGGCGGGCCGGCGCATCAACGACACTATGGGCCAGT
ATGTGGCGCAGGAGACGGTGAAGCGGCTTCTGCGCGGCCGCGTCGGGGCGTCCGGGCCGCTGCGCGTCACCGTGCTGGGT
CTGACCTTCAAGGAGGACGTGCCCGACATCCGCAACACCCGCGTGGTGGACATCGTGGCCGAGCTGAAAAGCTTCGGTGT
GGAGGTCGCTTTGCACGACCCGCTGGCCGCCGCGGATGAGGTGGCCCACGAGTATGGCCTGACCCTGACCGCGCGGGATG
CCCTGCCGCCCGCCGACGCGGTGGTGCTGGCGGTTCCACACGCGGCCTACCGGACGGAGGGCTGGGACCTGGTGAGCGGC
CTGCTGAAGGACCGGCGGGGCATCGTCATGGACGTGAAGGGCCTGCTCGACCGCGGCGCGGTGCCGGAAGGCGTGGATCT
CTGGCGGCTGTGA

Protein sequence :
MTHSRRISVIGLGYVGLPVAVAFGRMDVPVVAFDIDARRIAALRAGHDHTGEVADTDLAAARLHLTDDPADLAQADFHIV
TVPTPIDDARRPDLRPLLAASRTVGRHLKRGDVVVYESTVYPGATEMDCVPVLEAESGLTFGRDFTIGYSPERINPGDKE
HRFETITKVVSGSDPATRSLVAAVYGSVVKAGVHEAASLAVAEAAKVIENTQRDVNIALMNELAVIFHRMGIDTRDVLAA
AGTKWNFLKFQPGLVGGHCIGVDPYYLTHRAEQLGHNPEVILAGRRINDTMGQYVAQETVKRLLRGRVGASGPLRVTVLG
LTFKEDVPDIRNTRVVDIVAELKSFGVEVALHDPLAAADEVAHEYGLTLTARDALPPADAVVLAVPHAAYRTEGWDLVSG
LLKDRRGIVMDVKGLLDRGAVPEGVDLWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-104 57
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-90 52
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-90 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOBR_p60035 YP_004987579.1 UDP-glucose/GDP-mannose dehydrogenase family protein; putative Capsular polysaccharide biosynthesis protein VFG0431 Protein 2e-90 52