Gene Information

Name : fliI (AZOBR_p410065)
Accession : YP_004986934.1
Strain :
Genome accession: NC_016596
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 57119 - 58459 bp
Length : 1341 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8491729; Product type e : enzyme

DNA sequence : 
ATGCGCGTGCTTTCCAACCTTCTGTCCGAGATCGAGCGGATGCCGACCCGATCCTGGCGCGGCGAGATTCGCAGCGCCAC
CGGCATGACGCTGGAGGTGGAGGGGCTGCGCCGCGTCCTGGCGGTGGGCGACAAATGCTGGGCGGAGACGGCGCGCGGCC
AACGGCTGCTGTGCGAGACGATCGGCTTCCGCCAGGGCCGCACGCTGCTGATGGCCTTCGACAATCTGGACGGCGTGGCG
GAGGGCTGCGCCGCCGTCACCGACGACACCGCCTTCACGCTGCGCCCCGGCCCCGGCTGGCTGGGCCGCGTCGTCAACGC
GCTGGGCGAACCGATCGACGGGCGCGGCCCCTTGCGCAACGGCCACCACGCCCGCCCGTTGCGCGCCGCCCCGCCGCCGG
CCTACGCGCGCCGCCGGGTGGGGGCGAAGATGGACACCGGCGTGCGCGCCATCGACGTCTTCACGCCGATCTGCCGCGGC
CAGCGCATGGGCGTCTTCGCCGGGTCGGGCGTCGGCAAGTCGACGCTGCTGTCGATGGTCGCCCGCCACGCCGGGGCCGA
CGCCATCGTGATCGGGCTGGTCGGCGAGCGCGGGCGCGAGGTGCAGGAGTTCATCCAGGACGATCTGGGGGCGGACGGCC
TCGCCCGCTCCGTCGTCATCGTCGCCACCTCGGACGAGCCGCCGCTGATGCGCCGGCAGGCAGCATATCTCTGCCTGACC
GTGGCGGAGGAGCTGCGCGACCGCGGCCTGCACGTCCTCTGCCTGATCGACAGCGTGACGCGCTTCGCCATGGCCCAGCG
CGAGATCGGCTTGGCCGCCGGGGAGCCGCCGACCGCCAAGAGCTACCCGCCCAGCGTCTTCGCCGAACTCCCCAAACTGA
TGGAGCGCGCCGGGCCGGGACAAGAGGGCCAAGGCGACATCACCGGCATCTTCACCGTGCTGGTGGACGGCGACGACCAT
GACGAGCCGATCGCCGACGCGGTGCGCGGCATCCTGGACGGCCATGTCGTGCTGGACCGCCGCATCGCGGAGCAGGGGCG
CTACCCCGCCGTCAACGTGCTGCGCAGCGTGTCGCGCCTGCTGCCCGGCTGCCACACGGCGGAGCAGAACACCCTGCTGC
GCCGCGCGCGGAGCCTCGCAGCCACCTACGACAACATGCGGGAGCTGGTGCGCATCGGCGCCTACAAGCAGGGCACCGAC
GCGGAGGTGGACGACGCCGTCGCGCTGAACCCGGCGCTGGAGGAGTTCCTGCGCCAGGGCAAGGACGACGCCACGCCATC
CCTCGACTCCTTCCGTTTCCTCGACCGCATCCTCGCCGTTCCCGCCGGAGTTGTCCCATGA

Protein sequence : 
MRVLSNLLSEIERMPTRSWRGEIRSATGMTLEVEGLRRVLAVGDKCWAETARGQRLLCETIGFRQGRTLLMAFDNLDGVA
EGCAAVTDDTAFTLRPGPGWLGRVVNALGEPIDGRGPLRNGHHARPLRAAPPPAYARRRVGAKMDTGVRAIDVFTPICRG
QRMGVFAGSGVGKSTLLSMVARHAGADAIVIGLVGERGREVQEFIQDDLGADGLARSVVIVATSDEPPLMRRQAAYLCLT
VAEELRDRGLHVLCLIDSVTRFAMAQREIGLAAGEPPTAKSYPPSVFAELPKLMERAGPGQEGQGDITGIFTVLVDGDDH
DEPIADAVRGILDGHVVLDRRIAEQGRYPAVNVLRSVSRLLPGCHTAEQNTLLRRARSLAATYDNMRELVRIGAYKQGTD
AEVDDAVALNPALEEFLRQGKDDATPSLDSFRFLDRILAVPAGVVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 8e-73 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-72 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-72 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-72 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-72 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-72 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-72 45
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-73 44
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-73 44
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-70 44
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-65 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-61 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-61 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-60 43
unnamed AAL06369.1 EscN Virulence LEE Protein 6e-60 43
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-61 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-60 43
escN AAL57542.1 EscN Virulence LEE Protein 3e-60 43
escN CAC81862.1 EscN protein Virulence LEE II Protein 9e-61 43
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-60 43
escN AAC38383.1 EscN Virulence LEE Protein 7e-61 43
escN YP_003223475.1 translocator EscN Virulence LEE Protein 6e-61 43
escN CAI43874.1 EscN protein Virulence LEE Protein 5e-61 43
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-61 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-61 43
escN AAC31513.1 L0034 Virulence LEE Protein 3e-61 43
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-61 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-61 43
escN AAK26715.1 EscN Virulence LEE Protein 3e-60 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-54 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-61 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-54 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-52 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 7e-55 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 7e-55 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-56 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-55 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-55 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_004986934.1 flagellum-specific ATP synthase VFG2499 Protein 2e-79 49
fliI YP_004986934.1 flagellum-specific ATP synthase VFG1254 Protein 3e-80 47
fliI YP_004986934.1 flagellum-specific ATP synthase VFG2144 Protein 4e-78 47
fliI YP_004986934.1 flagellum-specific ATP synthase VFG2331 Protein 4e-81 46
fliI YP_004986934.1 flagellum-specific ATP synthase VFG0192 Protein 2e-69 45
fliI YP_004986934.1 flagellum-specific ATP synthase VFG0048 Protein 1e-74 45
fliI YP_004986934.1 flagellum-specific ATP synthase VFG0390 Protein 4e-70 43
fliI YP_004986934.1 flagellum-specific ATP synthase VFG0515 Protein 2e-61 43
fliI YP_004986934.1 flagellum-specific ATP synthase VFG0812 Protein 2e-61 43
fliI YP_004986934.1 flagellum-specific ATP synthase VFG0730 Protein 4e-61 43