Gene Information

Name : tnpA (AZOBR_p310296)
Accession : YP_004986357.1
Strain :
Genome accession: NC_016595
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 283965 - 286958 bp
Length : 2994 bp
Strand : -
Note : -

DNA sequence :
ATGCCCCGCCACCAGCTTCTATCCCCTCAGACGCGAGCCGCTCTGTTCGATCCACCGTCGGAGCCGACCGCCATCACGCG
CCTGTACACCCTCTCGCCGGACGATCTGGCGCACGTGCGTCGCCGGCGCCGTCCCTGGAACCGGCTCGGCTTCGCGATGC
AGCTGGCCTACCTGCGCCATCCTGGACGGGCCCTGGGAATTGGCGAGGAACCACCGACCGCCATGCTCGCTCACATCGCC
GGACAGGTCGGGGCCGATCCGGCATTGTTCGTCGACTACGCCCGGCGGGAGGAAGCCCGGCGCGAGCATTTGGCCGAACT
GCAAGCGGCCTTCGGGCTGTCGCCCTTCGGCTTGGCCGACTATCGGGCCATGTGGCGTGTGGCATCGGAGGTGGCCCGCG
GCACCGACCGGGGCGACGCCATCGCCTTGGCTGTAGTGGAAGAGCTGCGGGCGCGCCGCGTCCTGCTGCCGGTCGCCACC
GTGGTGGAGCGCCTCGGCCTCGCCGTCCGTGCCAGGGCTCGAGCCACCGCTTATGCCAGTCTGATCCGCGGGTTGGAGGA
TCGACAGACCGAGCGCCTCCTGGCGCTCCTGAAGGTGACGGAACCGGAGGGCCGCACCGGCTTGACGCAACTGCGCGAGT
GGTCGGAGGTGCCTTCCGCGGCGAATCTGGTCCGTCTGGCGGAGCGCTTGGCAACGGTGCGGGCCATCGGCATCGAAGCG
GATCGGGCGCGACGCATTCATCAAGTCCGCTATGCCATCATCGCCGGCGAAGCGGGAATCATGGATGCGCAGCACCTGTC
GCGCCTGGGCCCGGAACGCCGTCTTGCCGTCCTGACCGCCTTCGTCATCGAGCAGGAGGCCCGACTCAGCGACGCCGCCG
TGGAGATGTTCGACCGGCTGATGGGAGCCCTGTTCCGGCGCGCCGAGCGCAAGCGCACGGAACGGCTGACCGACCGGGCC
AAGGAGCAGGAAAGCTTGGTCTGGATGCACGCGGTGAGCGGCCGGGCTCTCGTCGCCGCCCGACGGAACGGGACCGATCC
GTTCGCCGCCATCGAGGCGGCCGTGGGGTGGGAAGCCTATGAGAAGAGTGTCGATCACGCCGTCGGCGTCGCCGAGACCG
CCGACGAAGGCAACAGCCTGCCCGAGGTGGTGGAGCGGCATGCGTCCGCCCGGCGGTTTGCCCCGACCTTCCTGCAAACC
TTTGCCTTCAGCTCGTACCGCAAGTCCGATCCGCTGCTCAAGGCGGTCGACGCCATCAAGGCACTGTATGCGTCGGAAGG
CCGGCCGACCCTGGCGAAGGACGCGCCGGTCTCCTTTCTCCAGCGCCGTTGGCGGCCCCTCGTGCTGCCACAGGGTAAGA
ACCTCGATCGCCGCGCCTATGAAATGGCCGTATTCGCGCATCTGCGCGAACGGCTGCGTGCCGGCGATGTCTGGATCGAG
GGCGCCCGCGCCTATCGACGGTTCACCGACTTTCTGCTGCCCCGGCCAACGTTCGAGGACCTGCGCAGCACCGGGAGCCT
TGACTTGCCCATCCCGGTGTCGTGGCCGGACTATGCCACGGAGCGGACGAAGCTCCTGGACGACCGATTGCGCGAGGTTG
CCGCGTTGGCCGAAGTCAACCGATTGCCGGGCGTTACGCTGGAGGACGGCCGCCTGACCATTTCGCCGCTGTCCCGCGCC
GTACCCGAGGCCGCGGGCGCTCTCGCCAAACGGCTGTCCGCGCTCCTGCCGCGCATACGGATCACCGAGATCCTGGCCGA
GGTCGACCGCTGGACCGGATTCGCCAGCAGCTTCACCCATGTGCGCACCGGCGAGCCGGCCTTCGACCGCGCCGCGGTGC
TCGGCACGGTGCTGGCGGACGGCACCAATCTGGGGCTGTCGCGCATGGCCGAGGCGTCGCGGGGCTTGAACCATGCCCGG
CTGATCTGGACGGCGGAGTGGCATGTGCGCGACGAAACCTACGCCGCTGCCCTGGCCACCGTGGTGAACGCCCACCACGC
CCACCCGATGGCCCACCACTGGGGGCCGGGCGACACCTCGTCGTCGGACGGGCAGTTCTTCCGGGCGGGCGGCCGTGGCG
AGGCGCGCTCCGACGTGAACGGCCGCTATGGCGACGACCCCGGCGCGCTGTTCTACACCCATGTCTCCGATCGGTTCTCT
CCCTTCCACACGAAGGTGATCTCGGCCACGGCGGGCGAGGCGGCACATGTGCTGGACGGCCTTCTGATGCACGGCAGCGC
GCTGTCCATCCGCGAGCACTACACCGATACGGCCGGCGCGACCGATCATGTGTCGGGACTCTGCCATCTTCTGGGGTTCC
GCTTCGCCCCTCGCGTCCGCGATCTCAAGGAGCGTCGGTTGTATGTGATTGACCGCACGGCCGATTACGGATTGCTGACG
CCATTGATCGGCGGCCCGGTGCGCCTGCATTTCGTCGAGGAATCCTGGGATGACCTGCTGTATCTGGCCACGTCCGTGCG
CACTGGGACCGCAGCGCCGTCCGCCCTCTTGCGCCGCCTCGCGGCCTACCCGCGGCAGAACCAGCTCGCCAAAGCGTTGC
GCGAGATCGGCCGCATCAAACGCACACTGGCAACCTTGGACTGGCTGAAGGACCCGGACCTCCGCCGTCGCTCCCATGCT
GGCCTGAACAAGGGGGAGGCGGAGCATTCGCTCAAGCGGGCCGTCTTCTTCCATCGTCTGGGCGAACTGCGTGACCGGAC
GTTCGAGAACCAGAGCCATCGGGCCTCGGGGCTCAACCTGGTGGTCGCCGCCATCGTGCTCTGGAACACCGTTTATCTGG
GTCGCGCCGTGGACGCGCTGCGCGCAGCCGGCGAAGACATTCCCGCCGACCTGTTAGCACATGTGGCGCCACTCGGCTGG
GAGCACATCGCGCTCACCGGAGACTATGTCTGGGCCGACGACGACGTGGATTCCTCGGTAGCGTTCCGACCGCTCCGGCG
AATTCCCGCTTCGTTCCAGAGGGTCGCCGCTTAG

Protein sequence :
MPRHQLLSPQTRAALFDPPSEPTAITRLYTLSPDDLAHVRRRRRPWNRLGFAMQLAYLRHPGRALGIGEEPPTAMLAHIA
GQVGADPALFVDYARREEARREHLAELQAAFGLSPFGLADYRAMWRVASEVARGTDRGDAIALAVVEELRARRVLLPVAT
VVERLGLAVRARARATAYASLIRGLEDRQTERLLALLKVTEPEGRTGLTQLREWSEVPSAANLVRLAERLATVRAIGIEA
DRARRIHQVRYAIIAGEAGIMDAQHLSRLGPERRLAVLTAFVIEQEARLSDAAVEMFDRLMGALFRRAERKRTERLTDRA
KEQESLVWMHAVSGRALVAARRNGTDPFAAIEAAVGWEAYEKSVDHAVGVAETADEGNSLPEVVERHASARRFAPTFLQT
FAFSSYRKSDPLLKAVDAIKALYASEGRPTLAKDAPVSFLQRRWRPLVLPQGKNLDRRAYEMAVFAHLRERLRAGDVWIE
GARAYRRFTDFLLPRPTFEDLRSTGSLDLPIPVSWPDYATERTKLLDDRLREVAALAEVNRLPGVTLEDGRLTISPLSRA
VPEAAGALAKRLSALLPRIRITEILAEVDRWTGFASSFTHVRTGEPAFDRAAVLGTVLADGTNLGLSRMAEASRGLNHAR
LIWTAEWHVRDETYAAALATVVNAHHAHPMAHHWGPGDTSSSDGQFFRAGGRGEARSDVNGRYGDDPGALFYTHVSDRFS
PFHTKVISATAGEAAHVLDGLLMHGSALSIREHYTDTAGATDHVSGLCHLLGFRFAPRVRDLKERRLYVIDRTADYGLLT
PLIGGPVRLHFVEESWDDLLYLATSVRTGTAAPSALLRRLAAYPRQNQLAKALREIGRIKRTLATLDWLKDPDLRRRSHA
GLNKGEAEHSLKRAVFFHRLGELRDRTFENQSHRASGLNLVVAAIVLWNTVYLGRAVDALRAAGEDIPADLLAHVAPLGW
EHIALTGDYVWADDDVDSSVAFRPLRRIPASFQRVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 47
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 46
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 44
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 44
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpA YP_004986357.1 transposase VFG1031 Protein 0.0 44