|
Name : clpB1 (AZOBR_p170093) Accession : YP_004985103.1 Strain : Genome accession: NC_016594 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 759320 - 761944 bp Length : 2625 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12054807, 12220194; Product type f : factor DNA sequence : ATGGACCTCGAAAAATACACGGATCGAGCGAAGGGTTTCCTCCAGTCGGCACAAACGCTCGCGGTGAGCCGCGGCCATCA GCGCCTGACGCCGGAGCACCTGCTCAAGGTGTTGCTGGAAGATTCGGAAGGGCTTTGCGCGAACCTCATCCGCGCGGCCG GAGGCGACCCTAAGGCAGCGCTTTCAGCGGTCGACGCCGCGCTCGACACGCTGCCACGCGTCGAAGGGGCCGGCGCCGGG CAGGTCTACATGGCGCCGGAGTTGGCGCGCGTCTTCGAGGCCGCCGAGCAGCTGGCGCAGAAGGCGGGCGACAGCTTCGT CACCGTGGAGCGGCTGCTGCTGGCGATGGCCGCCGCTGCGGGCATGCCGGCCGCGAAGGCGCTGGCCTCGGCGGGTGTCA ACGCCCAGGGCCTCAACAAGGCTATCGAGGACATCCGCAAGGGCCGCACCGCCGATACGGCGTCGGCCGAGGAAGGTTAC GACGCGCTGAAGAAGTACACGCGCGACCTCACGGCCGTGGCGCGCGATGGCAAGCTTGACCCCGTCATCGGCCGCGACGA GGAGATCCGCCGTACGATCCAGGTTCTCGCGCGCCGCACCAAGAACAACCCCGTGCTGATCGGCGAGCCGGGCGTCGGCA AGACCGCCATCGTCGAAGGCCTGGCGCAGCGCATCGTCAAGGGCGACGTGCCTGAAAGCCTGAAGGACAAGAAGCTGCTG GCGCTCGACCTCGGCTCGCTGCTGGCCGGGGCCAAGTACCGCGGCGAATTCGAGGAGCGGCTGAAGGCGGTCCTGTCGGA AGTCACCTCGGGCCGGGAAGGAGTCATCCTCTTCATCGACGAACTGCACACGCTGGTGGGAGCGGGCGGGGCGGAGGGGG CGATGGACGCCTCCAACATGCTGAAGCCGGCGCTTGCCCGCGGCGAACTGCATTGCGTCGGCGCCACCACGCTGGAGGAA TACCGCAAGCACATCGAGAAGGACGCCGCCCTGGCCCGGCGCTTCCAGCCCGTCCTTGTCGGCGAGCCGACGGTGGAGGA CACCATCTCCATCCTGCGCGGGATCAAGGAGAAGTACGAAGTTCACCACGGCGTGCGCATCACGGACAGCGCCATCGTCG CCGCGGCGACGCTGTCGCATCGCTACATCACCGACCGTTTCCTCCCCGACAAGGCCATCGACCTGATGGACGAAGCGGCC TCGCGGCTTCGTATGGCGGTCGATTCCAAGCCTGAGGAGATCGACGAACTCGATCGCCGCATCGTGCAGATGAAGATCGA GCGCGAAGCGCTCAAGAAGGAGAGCGATCCGGCCTCGCGGGAGCGCCTGCAGAGGCTGGAGAAGGAGCTCAGCGAACTCG AGCAGAAATCCGCCGAACTCACGGCGACGTGGCGGGCCGAGAAGGAGAAGCTCGCCGGCGCGCGCACGCTGAAGGAGCGG CTCGACCAAGCCCGCATCGAACTGGAGCAGGCGCAGCGGCGCGGCGACTGGACCCGCGCGGGCGAACTCGCCTACGGCAT CCTCCCCGATCTCGAAAGGCAGCTGAAGGAAGCCGAGGCACAAGGCGACCAGCGGATGCTCGAGGAGGCGGTCACCGCCG AGCACATCGCCGCCGTCGTGTCCCGCTGGACCGGGATCCCGGTCGACAAGATGCTGGAGGGCGAGCGCGAGAAGCTGCTG CACATGGAAGGCGCGCTGAGGCAGCGTGTCATCGGCCAGGACGAAGCCATCGTCGCGGTCTCGAACGCGGTGCGCCGCGC CCGCGCCGGGCTTCAGGATCCAAACCGGCCGATGGGATCCTTCCTGTTCCTCGGACCCACCGGCGTGGGCAAGACCGAGC TGACCAAGGCACTGGCCGAATTCCTCTTCGACGACGAGCACGCGATGGTGCGCATCGACATGTCGGAGTTCATGGAGAAG CACTCCGTGGCCCGCCTGATCGGCGCCCCTCCGGGCTACGTCGGCTACGAAGAGGGAGGCAGCCTGACCGAGGCGGTGCG GCGCCGGCCCTATCAGGTGATCCTGTTCGACGAGGTGGAGAAGGCGCACCCGGATGTCTTCAACGTGCTGCTCCAGGTGC TCGACGACGGGCGCCTGACCGATGGGCAGGGCCGCACGGTCGACTTCCGCAACACGCTGATCGTGATGACCTCCAACCTC GGCAGCGAGTATCTCGCGACCTTGGGGGAGGACCAGGACGTTGACACGGTGCGCGCCGAGGTGATGGAGGCGGTGCGGGC GGCGTTCCGGCCCGAGTTCCTGAACCGGCTCGACGAGATCCTGATCTTCCGCCGCCTCTCGCGCGAGGACATGAGCGGCA TCGTCGACATCCAGTTCCGGCGGCTCCAACGCCTGCTCGACGACCGCAAGCTCGTGCTGGAGGTGGACGACGCGGCGAAG CGCTGGCTGGCCGACGCCGGCTACGATCCAGTGTACGGCGCCCGGCCCTTGAAGCGGGTGATCCAGCGCGAACTGCAGAA TCCGCTCGCGGAGATGATCCTGCGCGGCAAAGTCCGCGACGGCGATACGGTCCGGGTCACCGCCACGGAGCTGGGTCTGC TCATCGAACCGCCGCAGCATGGCGATGGGGCGACCGAGCAGCCGTCTCGAAACGCTGCGGAGTGA Protein sequence : MDLEKYTDRAKGFLQSAQTLAVSRGHQRLTPEHLLKVLLEDSEGLCANLIRAAGGDPKAALSAVDAALDTLPRVEGAGAG QVYMAPELARVFEAAEQLAQKAGDSFVTVERLLLAMAAAAGMPAAKALASAGVNAQGLNKAIEDIRKGRTADTASAEEGY DALKKYTRDLTAVARDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPESLKDKKLL ALDLGSLLAGAKYRGEFEERLKAVLSEVTSGREGVILFIDELHTLVGAGGAEGAMDASNMLKPALARGELHCVGATTLEE YRKHIEKDAALARRFQPVLVGEPTVEDTISILRGIKEKYEVHHGVRITDSAIVAAATLSHRYITDRFLPDKAIDLMDEAA SRLRMAVDSKPEEIDELDRRIVQMKIEREALKKESDPASRERLQRLEKELSELEQKSAELTATWRAEKEKLAGARTLKER LDQARIELEQAQRRGDWTRAGELAYGILPDLERQLKEAEAQGDQRMLEEAVTAEHIAAVVSRWTGIPVDKMLEGEREKLL HMEGALRQRVIGQDEAIVAVSNAVRRARAGLQDPNRPMGSFLFLGPTGVGKTELTKALAEFLFDDEHAMVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGSLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNL GSEYLATLGEDQDVDTVRAEVMEAVRAAFRPEFLNRLDEILIFRRLSREDMSGIVDIQFRRLQRLLDDRKLVLEVDDAAK RWLADAGYDPVYGARPLKRVIQRELQNPLAEMILRGKVRDGDTVRVTATELGLLIEPPQHGDGATEQPSRNAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-92 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB1 | YP_004985103.1 | chaperone | VFG0079 | Protein | 9e-158 | 47 |
| clpB1 | YP_004985103.1 | chaperone | VFG2076 | Protein | 1e-108 | 45 |
| clpB1 | YP_004985103.1 | chaperone | VFG2084 | Protein | 7e-97 | 42 |
