Gene Information

Name : AZOBR_p130074 (AZOBR_p130074)
Accession : YP_004984670.1
Strain :
Genome accession: NC_016594
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter, large permease component (DctM-like)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 325239 - 326519 bp
Length : 1281 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14668138, 15870475; Product type t : transporter

DNA sequence :
ATGGCCCTTGCGGTCTTCCTCTCCTCGCTGTTCGGCCTGATGCTGCTCGGCATGCCCATCGCCTTCGCCCTGATGCTGAC
GGGCGTGGCGCTGATGGTGCATCTCGACTTCTTCGACGCCCAGCTCGTCGCCCAGAACATGCTGAGCGGCGCCGACAACT
ACCCGCTGATGGCGGTGCCCTTCTTCATCCTGGCCGGCGAGCTGATGAACGCCGGCGGCATCTCGCAGCGGATCATCAAC
CTCGCGGTCAGCCTCGTCGGGCACATCCGCGGCGGCCTGGGCTATGTGACCATCGGCGCGTCGGTGATGCTGGCCAGCCT
GTCCGGCTCGGCCATCGCCGACACGGCGGCGCTCGCCACGCTGCTGATTCCGATGATGCGCGACAACGGCTATCCGGTGC
CGCGCTCCGCCGGCCTGATCGCGTCGGGCGGCATCATCGCCCCGATCATCCCGCCCAGCATGCCCTTCATCATCTTCGGC
GTGACCACCAACACCTCGATCAGCGGCCTGTTCATGGCCGGCATCGTGCCCGGCCTGCTGATGGGCGCCGGTCTGGTCAT
CACCTGGATGTTCGTGGTGCGCGGCATGACCGTGAAGCTGCAGCCCAAGGCGAGCTGGGGCGAGCGCCGCACCGCGCTGG
TCGAGGGCGTCTGGGCGCTGGCCCTGCCGGTCATCATCATCGGCGGCCTGCGCGGCGGCATCTTCACGCCGACCGAGGCC
GCGGTGGTCGCCGCCGTCTATTCGCTGGTCGTGGCGCTGTTCGTCTACCGGCAGGTGACGCTGAAGGATCTGGTGCCGCT
GCTGGTCCAGGCCGCGCGCACCACCAGCACGGTGATGTTCCTGTGCGCGGCGGCTCTGGTGTCGTCCTACATGGTGACCC
TGGCCGACCTGCCGCAGCAGATGAACGAGATGCTGGCCCCGCTGCTGCACGAGCCAAAGCTGCTGATGGTCGCCATCACG
CTGCTGCTGCTGGCCGTCGGCACAGTGATGGACCTGACGCCGACGATCCTGGTGCTCGGCCCCGTGCTGACCCCGCTGGC
CGCGGCGGCGGGCATCGACCCGACCTATTTCGGCGTGATGTTCGTCCTGACCGGCACGCTGGGCCTGATCCATCCGCCGG
TCTGCACGGTGCTGAACGTGGTGTGCGGCGTCGCCCGCATCTCGCTGGAAAGCGCCACGCGCGGCATCTGGCCGTTCCTG
CTGACCTACCTGCTTCTGCTGTGCCTGCTGATCGCCGTTCCGGAGATCGTCACGGCCCCGCTGGCCTTTTTCCGCCATTA
A

Protein sequence :
MALAVFLSSLFGLMLLGMPIAFALMLTGVALMVHLDFFDAQLVAQNMLSGADNYPLMAVPFFILAGELMNAGGISQRIIN
LAVSLVGHIRGGLGYVTIGASVMLASLSGSAIADTAALATLLIPMMRDNGYPVPRSAGLIASGGIIAPIIPPSMPFIIFG
VTTNTSISGLFMAGIVPGLLMGAGLVITWMFVVRGMTVKLQPKASWGERRTALVEGVWALALPVIIIGGLRGGIFTPTEA
AVVAAVYSLVVALFVYRQVTLKDLVPLLVQAARTTSTVMFLCAAALVSSYMVTLADLPQQMNEMLAPLLHEPKLLMVAIT
LLLLAVGTVMDLTPTILVLGPVLTPLAAAAGIDPTYFGVMFVLTGTLGLIHPPVCTVLNVVCGVARISLESATRGIWPFL
LTYLLLLCLLIAVPEIVTAPLAFFRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 1e-34 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 1e-34 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 9e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOBR_p130074 YP_004984670.1 TRAP dicarboxylate transporter, large permease component (DctM-like) VFG1110 Protein 5e-35 42