Gene Information

Name : clpV (AZOBR_p1140127)
Accession : YP_004985841.1
Strain :
Genome accession: NC_016594
Putative virulence/resistance : Virulence
Product : protein clpV1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1544024 - 1546639 bp
Length : 2616 bp
Strand : -
Note : -

DNA sequence :
GTGACCGCCGACATCAAGTCCCTCATCGGAAAGCTCGACCGCGACGGGCGCAAGGTTCTGGAACGCTCCGCCGCGCTGTG
CGTCTCGCAGACCCATTACGACGTCGAGGCGGAGCATGTGCTGCTGGCCCTGCTGCGGCTGAAGGACGCTACCGTCGCCG
GCATCCTGCGCCATTACGGCGTCGAGGCGGGCCGGCTGGAGACGGAACTGGACGCGGCGCTGGACCGCATCCGCCGCGGC
AACAGCCGCACCCCGGCCTTCTCCCCCCGCGTGCCAGAGATGCTGGAGACGGCGCTGCTGATCTCCGTCACCCATCTGGA
CAGCCCGCAGATCCTCCTCCCGGCCATCCTCTGGGCCGCGGTCGCCTGCGATTCCGTGCGGGCGGTGATCACGGAGTCCG
CCCCCTCGCTGCTCGCCCTGCCGCGCGAGCGCACCGCGTCCGACCTGCCGGAACTGGTGCGCGTTCTGAAGGAGGGCGGA
CCGTCCGCCGCCGCGTCCGACTCCTCTCCCACCGCCGCTCCGCTCTCCGCCGCGTCGGACGGGCGGGCCATGCTGGATCA
GTACAGCCAGGACCTGACCGCCCAGGCCAAGGCCGGGAAGATCGACCCGGTGATCGGGCGCGACCGCGAGATCCGGCAGG
TCATCGACGTGATGATGCGCCGCCGCCAGAACAACCCGATCCTCGTCGGCGACCCCGGCGTCGGCAAGACCGCCATTGTG
GAAGGGCTGGCCCTGCGCATCGCCGAGGGCGACGTGCCGCCGCCGCTGCGCGGCATGGTCATCCGCACGCTCGACCTCGG
GCTGCTGCAAGCCGGAGCCGGGGTGAAGGGCGAGTTCGAGAACCGGCTGAAGTCGATCATCAAGGAGGTCTCGGCCTCCC
CCGTGCCGATGGTCGTCTTCATCGACGAGGCGCACGCGCTGATCGGCGCCGGCGGAGCCGCTGGCCAGGGCGACGCCGCC
AACCTGCTGAAGCCCGCCCTGGCCCGTGGCGAGTTTCGCACCATCGCCGCCACCACCTGGGCCGAGTACAAGAAGTATTT
CGAGAAGGACCCGGCGCTGGCCCGCCGCTTCCAGCCCGTCTCGGTGCCGGAACCGGACGAGACGGCGGCGGCCGCCATGC
TGCGCGGCCTCGTCCGCCGCTTCGAGGAGCATCACGGGGTCAGCGTGCTGGACGACGGCATCGCCGCCGCGGTCGCCCTG
TCCGCCCGCTACATCCCCGCCCGCCAGTTGCCTGACAAGGCGATCAGCGTGCTCGACACCGCCTGCGCCCGCGTCGCCAT
CGCCCGCAGCTCCAAGCCCGAGGCCATCGAGGCGATGGAGCGCGAGGACGCCATCCTCGCCCGCGAGGCGGAGCGGCTGG
AGGCCGAACCCGGCACCGCCCACCACGCCCGCCTGTCGCAGATTTCGCAACGCCGCGGCGCGCTCTCCCTGGAGAAGGCC
GCGCTGGACGAGCGCTGGACGCGCGAGCACGATCTGGTCAATGCGGTGGAAGCCGCGCTGAAGGCCGGCCATGCGGTGGA
GGCCGCCGCGGCCATGGAAAAGCTGAAGGCCGTGCAGAGCGACAGCCCGCTGGTCCCGCACCGGGTGGACGGTGCGGTGG
TCGCCGCCGTGGTGTCGAACTGGACCGGCATCCCGGTCGGTTCGATGTCCAAGGACGACCTGGAGGTGGTCGCCACGCTG
GAGGACCGCATGGCCGCCCGCGTCGTCGGCCAGCCGCAGGCGCTCCAGGCCATCGCGCGGGCCGTGCGCGGCTACCGCGC
CGGGCTGGGCGAGCCGCAGCGCCCCATCGGCGTCTTCCTGCTGAGCGGCCCGAGCGGCGTCGGCAAGACCGAAACCGCCC
TGGCGCTCGCCGAGCTGCTGAACGGCGGCGAGGACAGCCTGATCACCATCAACATGTCGGAGTATCAGGAGGCCCACGCC
GTGGCGACGCTGCGCGGCGCCCCGCCGGGCTATGTCGGCTACGGCAGCGGCGGCGTGCTGACCGAGGCGGTGCGCCGCCG
CCCCCACGCCGTGCTGCTGATGGACGAGGTCGAAAAGGCCCACCCCGACGTGCTGGACATGTTCTATCAGGTCTTCGACA
AGGGCGTTCTGGAGGACGGCGAGGGGGTGGAGGTGGACTTCCGCAACACGCTGATCCTGCTGACCAGCAACCTGGGGGAC
ACCGAGCTGTTCGCATTGGGCCGCGAGGCGCTCGACGCCGGGCGCATCGGCGAGGCGCGGGAGGATGGGCTGGCCGCCAT
CTCCGACGTGCTGCGCCGCCGCTTCCGCCCGGCCTTCCTCGGCCGCCTGTCGGTCGTGCCCTATTACCCGCTGAGCGAGG
CGCAGATCCGCCGCATCGTGACGATGAAGCTGGACAAGCTGCAACGCCGCACCGCCGGCAACCGCGGCGCCGAGTTGGCC
GTCACCGACGCGGCGGTGGAGGCGCTGGTTCTGCGGGCGCTGAACTCCGACGCCGGGGCGCGCATGATCGACACGCTGCT
GTCGGAGTTCGTGGTGCCGGAGGTGGCGATCCGCATCCTCGACCGCGTCGCCGCCGGCCAGCCGGTGGGCCGCATCACCG
TGGACCACGGCGCGGACGGCCGCTTCACCGTCAGCGTGGACGGCACGGCGGCCTGA

Protein sequence :
MTADIKSLIGKLDRDGRKVLERSAALCVSQTHYDVEAEHVLLALLRLKDATVAGILRHYGVEAGRLETELDAALDRIRRG
NSRTPAFSPRVPEMLETALLISVTHLDSPQILLPAILWAAVACDSVRAVITESAPSLLALPRERTASDLPELVRVLKEGG
PSAAASDSSPTAAPLSAASDGRAMLDQYSQDLTAQAKAGKIDPVIGRDREIRQVIDVMMRRRQNNPILVGDPGVGKTAIV
EGLALRIAEGDVPPPLRGMVIRTLDLGLLQAGAGVKGEFENRLKSIIKEVSASPVPMVVFIDEAHALIGAGGAAGQGDAA
NLLKPALARGEFRTIAATTWAEYKKYFEKDPALARRFQPVSVPEPDETAAAAMLRGLVRRFEEHHGVSVLDDGIAAAVAL
SARYIPARQLPDKAISVLDTACARVAIARSSKPEAIEAMEREDAILAREAERLEAEPGTAHHARLSQISQRRGALSLEKA
ALDERWTREHDLVNAVEAALKAGHAVEAAAAMEKLKAVQSDSPLVPHRVDGAVVAAVVSNWTGIPVGSMSKDDLEVVATL
EDRMAARVVGQPQALQAIARAVRGYRAGLGEPQRPIGVFLLSGPSGVGKTETALALAELLNGGEDSLITINMSEYQEAHA
VATLRGAPPGYVGYGSGGVLTEAVRRRPHAVLLMDEVEKAHPDVLDMFYQVFDKGVLEDGEGVEVDFRNTLILLTSNLGD
TELFALGREALDAGRIGEAREDGLAAISDVLRRRFRPAFLGRLSVVPYYPLSEAQIRRIVTMKLDKLQRRTAGNRGAELA
VTDAAVEALVLRALNSDAGARMIDTLLSEFVVPEVAIRILDRVAAGQPVGRITVDHGADGRFTVSVDGTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-134 44
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-94 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpV YP_004985841.1 protein clpV1 VFG2084 Protein 7e-125 41