Gene Information

Name : clpB2 (AZOBR_p1110063)
Accession : YP_004985351.1
Strain :
Genome accession: NC_016594
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1021623 - 1024253 bp
Length : 2631 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14550559, 14640692; Product type f : factor

DNA sequence :
ATGGATTTCGAGAAATACACCGAGCGCAGCCGTGGCTTCGTGCAGGCGGCGCAGACCCTGGCCCTGCGGCGCGGCCACCA
GCGGCTGACGCCGGAACATCTGCTGAAGACCCTTCTGGACGACAAGGAAGGCTTGGCCGCCAACCTGATCCGGGCGGCCG
GCGGCGACCCCGCCCTGGCGCTGTCGGGTGTGGACGCCGAGCTGGACAAGCAGCCCAAGGTGGAAGGCGCCGGGGCCGGT
CAGGTGTATCTGACGCCGGAACTCTCCCGCGTGTTCGAGCAGGCCGAGGCGGTCGCCAAGAAGGCCGGCGACAGCTACGT
CACGGCGGAGCGCATCCTGCTGGCGCTCGCCATGGCCGACGGCACGCCGTCCGCCGCGGTGCTGAAGCGCGCGGGCGTCA
CCCCGCAGGCGCTGAACACCGCGATCAACGAGGTGCGCAAGGGCCGCACCGCCGACACCGCCAGCGCCGAGCAGGGCTAC
GACGCGCTGAAGAAGTACGCCCGCGACCTGACCGAGTCGGCGCGCGAGGGCAAGCTCGACCCCGTCATCGGGCGCGACGA
GGAAATCCGCCGCACCATCCAGGTGCTGGCCCGCCGCACCAAGAACAACCCCGTCCTGATCGGCGAGCCGGGCGTCGGCA
AGACCGCCATCGTCGAGGGCCTCGCCCAGCGCATCGTCAAGGGCGACGTGCCGGAAGGGCTGAAGAACAAGAAGCTGCTG
TCGCTCGACCTCGCCGGCATGGTGGCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTCCAGGA
GATCCAGGCGGCGGCGGGCGAGATCATCGTCTTCATCGACGAGCTGCACACGCTGGTTGGCGCCGGCAAGGCGGACGGCG
CCATGGACGCCTCCAACATGCTGAAGCCGGCGCTGGCGCGCGGCGAGCTGCACTGCGTCGGCGCGACCACCCTGGACGAG
TACCGCAAGCACATCGAGAAGGACGCGGCGCTGGCCCGGCGCTTCCAGCCCGTCTTCGTGCCCGAGCCGACGGTGGAGGA
CACCATCTCCATCCTGCGCGGCCTGAAGGAGCGCTACGAGGTGCACCACGGCGTGCGCATCACCGACGCGGCCATCGTGT
CGGCGGCGACCCTGTCGAACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATCGACGAGGCGGCG
AGCCGCCTGCGCATGGCCGTGGACAGCAAGCCGGAGAACATCGACGAGTTGGACCGCCGCATCATCCAGCTCAAGATCGA
GCGGGAGGCGCTGAAGCGCGAGTCCGACGACGCCTCGCGCGCCCGGCTCGCCAATCTGGAAGGCGAGCTGGCCGACCTGG
AGCAGGAATCCGCCGAGCTGACCGCCAAGTGGCAGGCCGAGAAGGACCAGCTCCAGGGCGCCCAGAAGATCAAGGAAGAC
CTGGAGAAGGCCCGCACCGAGCTGGAGCAGGCCCAGCGCGACGGCAATTGGGGCCGGGCCGGCGAGCTGGCCTACGGCGT
CATCCCCGACCTGGAGAAGCGTCTGAAGGAGGCGGAGGCCCACGCCGCCAACCGCATGCTGAACGAGGAGGTGCGCGACA
GCGACATCGCCGCCGTGGTCAGCCGCTGGACCGGCGTGCCGGTGGACAAGATGCTGGCCGGCGAGCGGGAGAAGCTGCTG
GCGATGGAGACCCGCCTGAAGACGCGCGTGATCGGCCAGGACGAGGCCATCGTGGCGGTCTCCAACGCGGTGCGCCGCGC
CCGCGCCGGCCTGCAGGACCCCAACCGGCCGATCGGCTCCTTCCTGTTCCTTGGCCCGACCGGCGTCGGCAAGACCGAGC
TGACCAAGGCGCTGGCCGAATTCCTGTTCGACGACGAGACGGCGATGGTCCGGCTCGACATGTCGGAATACATGGAGAAG
CACTCGGTCGCCCGCATGATCGGCGCGCCTCCGGGCTATGTCGGCTATGAGGAGGGCGGGGCGCTGACCGAGGCGGTGCG
GCGCCGGCCCTATCAGGTGGTCCTGTTCGACGAGGTGGAGAAGGCCCATCCGGACGTCTTCAACGTGCTGCTCCAGGTGC
TCGACGACGGGCGCCTGACCGACGGGCAGGGGCGGACGGTGGATTTCCGCAACGTGGTCATCATCATGACCTCGAACCTC
GGCTCCGAGGTGCTGGCGGCCCAGCCGGAAGGCCAGGACAGCGGCGCCGTGCGCGACGAGGTGATGGAGGTGGTGCGCGC
CCACTTCCGGCCGGAGTTCCTGAACCGGCTGGACGAGATCCTGCTGTTCCACCGCCTGGACCGCAGCCATATGGGCGGGA
TCGTGACGATCCAGCTCGGCCGGCTGATCCGCATGCTGGCCGACCGCGACATCACGCTGGAGGTGGACGAGGCGGCGACG
CAATGGCTGGCCGAGGCCGGCTACGACCCGGTCTATGGCGCGCGTCCGCTGAAGCGGGTGATCCAGCGGGAGCTTCAGAA
CCCGCTGGCCACCATGATCCTGGAGGGCCGCGTCGCCGACGGCCAGACGGTCAAGGTGGGGGCGGAAGGCGGCGAGCTGA
CCATCAACGGCCTGCCCGTCTCCGCCCAGGTGCGCAGCGCGGCGACACAGCCGGTGACGACGGTTCATTGA

Protein sequence :
MDFEKYTERSRGFVQAAQTLALRRGHQRLTPEHLLKTLLDDKEGLAANLIRAAGGDPALALSGVDAELDKQPKVEGAGAG
QVYLTPELSRVFEQAEAVAKKAGDSYVTAERILLALAMADGTPSAAVLKRAGVTPQALNTAINEVRKGRTADTASAEQGY
DALKKYARDLTESAREGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKNKKLL
SLDLAGMVAGAKYRGEFEERLKAVLQEIQAAAGEIIVFIDELHTLVGAGKADGAMDASNMLKPALARGELHCVGATTLDE
YRKHIEKDAALARRFQPVFVPEPTVEDTISILRGLKERYEVHHGVRITDAAIVSAATLSNRYITDRFLPDKAIDLIDEAA
SRLRMAVDSKPENIDELDRRIIQLKIEREALKRESDDASRARLANLEGELADLEQESAELTAKWQAEKDQLQGAQKIKED
LEKARTELEQAQRDGNWGRAGELAYGVIPDLEKRLKEAEAHAANRMLNEEVRDSDIAAVVSRWTGVPVDKMLAGEREKLL
AMETRLKTRVIGQDEAIVAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRLDMSEYMEK
HSVARMIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVVIIMTSNL
GSEVLAAQPEGQDSGAVRDEVMEVVRAHFRPEFLNRLDEILLFHRLDRSHMGGIVTIQLGRLIRMLADRDITLEVDEAAT
QWLAEAGYDPVYGARPLKRVIQRELQNPLATMILEGRVADGQTVKVGAEGGELTINGLPVSAQVRSAATQPVTTVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-108 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-108 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-108 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB2 YP_004985351.1 ATP-dependent chaperone VFG0079 Protein 1e-180 49