Gene Information

Name : AZOBR_p1110025 (AZOBR_p1110025)
Accession : YP_004985319.1
Strain :
Genome accession: NC_016594
Putative virulence/resistance : Virulence
Product : putative two-component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 984089 - 984757 bp
Length : 669 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator

DNA sequence :
GTGAGCGCCATGCGCCTGCTCGTCGTCGAGGATGATCCGGCGCTCGCCCGCCAGCTTGCCGAGCGGCTGGAGGGCGAGGG
CTACGCCGTGGACCGCGCCGCCGACGGCGAGGAGGGGCAGTTCCTCGGCGAGACCGAACCCTACGACGCCATCGTCCTCG
ACCTCGGCCTGCCGCGGGTCGACGGGCTGACGGTGCTGCGCTCCTGGCGCGCGGGGGGAATCGCCACGCCGGTCATCATC
CTGACCGCCCGCGGCGCCTGGACGGAGAAGGTCCAGGGCATCGACGCCGGGGCCGACGACTATCTGGCGAAGCCCTTCAG
CATGGAGGAGTTGCTGGCCCGCATCCGGGCGCTGATCCGCCGCTCCAAGGGCCACGCCTCGGCGGAGATCGCCTGCGGCG
GGGTGGTGCTGGACACCCGCTCGGGCCGGGTCACGCTGGACGGGCAGACGGTGGATCTGACCGGGCACGAGTTCCGCGTG
CTCGATTACCTGATGCATCGCAAGGGGCAGCTCGTCTCCCGCACGGAGCTGACCGAGCACATCTACGCCCAGGATTTCGA
CCGGGATTCCAACACCATCGAGGTCTTCGTCGGCCGCCTGCGCCGCAAGCTGGGCGCCGACCTGATCAAGACCGTGCGCG
GGCTCGGCTACAAGCTGGAGGCGCCGTGA

Protein sequence :
MSAMRLLVVEDDPALARQLAERLEGEGYAVDRAADGEEGQFLGETEPYDAIVLDLGLPRVDGLTVLRSWRAGGIATPVII
LTARGAWTEKVQGIDAGADDYLAKPFSMEELLARIRALIRRSKGHASAEIACGGVVLDTRSGRVTLDGQTVDLTGHEFRV
LDYLMHRKGQLVSRTELTEHIYAQDFDRDSNTIEVFVGRLRRKLGADLIKTVRGLGYKLEAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-27 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator NC_002516.2.879194.p Protein 4e-40 48
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator BAC0487 Protein 4e-32 46
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator CP000647.1.gene1136. Protein 9e-35 42
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator BAC0530 Protein 3e-35 42
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator CP001918.1.gene2526. Protein 5e-34 41
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator CP001138.1.gene1939. Protein 4e-35 41
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator BAC0125 Protein 5e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator VFG1390 Protein 2e-27 44
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator VFG0473 Protein 3e-28 43
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator VFG0475 Protein 4e-35 41
AZOBR_p1110025 YP_004985319.1 putative two-component transcriptional regulator VFG0596 Protein 3e-27 41