Gene Information

Name : GTCCBUS3UF5_38840 (GTCCBUS3UF5_38840)
Accession : YP_004984282.1
Strain : Geobacillus thermoleovorans CCB_US3_UF5
Genome accession: NC_016593
Putative virulence/resistance : Unknown
Product : ribosomal RNA large subunit methyltransferase H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3565301 - 3565780 bp
Length : 480 bp
Strand : -
Note : similar to rRNA large subunit methyltransferase PRK00103; similar to Ribosomal RNA large subunit methyltransferase H of Bacteria UniRef RepID=RLMH_EXIS2

DNA sequence :
GTGCATATTTCCATTGTCGCTGTGGGTAAATTGAAGGAAAAATATTTAATCGCTGGAATTAATGAATATACAAAGCGTCT
GTCCGCATACGCCAAAATCGACATCATCGAAGTCGCTGATGAAAAAACGCCGGAGCGGGCGAGCGAACTTGAGGAGGAAC
AAATCAAAGAGCGCGAGGGAGGACGGCTGCTGGCGAAAATTCCGCATGACGCTCACGTCATCGCGCTCGCGATTGAAGGG
AAGATGCAATCGTCCGAGCAATTCGCCGCCCGTCTCGATGAGCTCGCCACCTACGGCAAAAGCAAAGTGGTGTTCGTCAT
CGGCGGCTCGCTTGGCTTAAGCAAACAAGTGATGGCGCGCGCCGATGAGACCCTGTCGTTTTCGAAAATGACGTTTCCAC
ACCAGCTGATGCGCCTCATTTTGCTCGAGCAAATTTACCGCGCATTTCGCATTAACCGCGGGGAACCGTATCATAAGTAA

Protein sequence :
MHISIVAVGKLKEKYLIAGINEYTKRLSAYAKIDIIEVADEKTPERASELEEEQIKEREGGRLLAKIPHDAHVIALAIEG
KMQSSEQFAARLDELATYGKSKVVFVIGGSLGLSKQVMARADETLSFSKMTFPHQLMRLILLEQIYRAFRINRGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 4e-44 63
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 5e-45 62
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 5e-45 62
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 5e-45 62
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 5e-45 62
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 5e-45 62
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 8e-45 62
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 8e-45 62
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 5e-45 62
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 5e-45 62
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 8e-45 62
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 5e-45 62
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 5e-45 62
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 5e-45 62
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-40 61
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-42 60
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 5e-44 60
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 1e-42 60