Gene Information

Name : GTCCBUS3UF5_30770 (GTCCBUS3UF5_30770)
Accession : YP_004983479.1
Strain : Geobacillus thermoleovorans CCB_US3_UF5
Genome accession: NC_016593
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2826352 - 2827059 bp
Length : 708 bp
Strand : -
Note : similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain COG0745; similar to Response regulator of Firmicutes UniRef RepID=C6VLR9_LACPJ

DNA sequence : 
ATGGGACGAAAAATTTTAGTTGTCGATGACGAACAGCCGATTGTGACTCTGTTGTCGTACAATTTGGAGAAAGCCGGATT
TCACGTCGTGACCGCTCACGATGGCGAAGAGGCGCTCGTGAAAGTAGCGTCCGAGCAGCCGGCGCTCATTATTTTGGACT
TGATGCTGCCGAAGCTTGACGGCGTTGATGTGTGCAAGCGGCTTCGCCAGCAGCAAATCATGACGCCGATTTTAATGTTG
ACGGCTCGCGATGATGAATTTGACAAAGTGCTTGGTCTTGAGCTTGGCGCCGACGACTATATGACAAAGCCGTTCAGCCC
GCGCGAAGTCATTGCCCGCGTCAAGGCGATTTTGCGCCGCACGGAGATCGTTCAGCCGGCGGCTGAATCGAGCGAGCGGC
TTGTTGTTGGCGATCTGGAAATTTTTCCGGAACGCTATGAAGCAACGATCGACGGCAAGCCGCTTGAGCTGACGCCGAAA
GAGTTTGAGTTGCTCCTTTATTTGGCTCGCCATAAAGGGCGGGTGTTGACGCGCGACCAGCTGCTCAGCGCCGTGTGGAA
CTACGAGTTTGCCGGCGATACACGCATTGTCGACGTCCATATCAGCCACTTGCGCGAGAAGATCGAAACCGATACGAAAA
AACCGATGTACATTAAAACGGTGCGCGGCCTTGGCTACAAGTTGGAGGAACCGAAGCGGCATGAATAG

Protein sequence : 
MGRKILVVDDEQPIVTLLSYNLEKAGFHVVTAHDGEEALVKVASEQPALIILDLMLPKLDGVDVCKRLRQQQIMTPILML
TARDDEFDKVLGLELGADDYMTKPFSPREVIARVKAILRRTEIVQPAAESSERLVVGDLEIFPERYEATIDGKPLELTPK
EFELLLYLARHKGRVLTRDQLLSAVWNYEFAGDTRIVDVHISHLREKIETDTKKPMYIKTVRGLGYKLEEPKRHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-41 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_007793.3914279.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002745.1124361.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_009782.5559369.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002951.3237708.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_003923.1003749.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002758.1121668.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_009641.5332272.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_013450.8614421.p0 Protein 2e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002952.2859905.p0 Protein 4e-76 67
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_007622.3794472.p0 Protein 3e-76 66
GTCCBUS3UF5_30770 YP_004983479.1 response regulator HE999704.1.gene2815. Protein 3e-73 63
GTCCBUS3UF5_30770 YP_004983479.1 response regulator AE016830.1.gene1681. Protein 2e-64 55
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_012469.1.7685629. Protein 3e-57 54
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_012469.1.7686381. Protein 7e-63 53
GTCCBUS3UF5_30770 YP_004983479.1 response regulator AE000516.2.gene3505. Protein 4e-42 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP004022.1.gene3215. Protein 1e-40 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP001918.1.gene5135. Protein 2e-33 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP001138.1.gene4273. Protein 5e-38 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0533 Protein 1e-37 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002695.1.915041.p Protein 1e-37 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP000647.1.gene4257. Protein 1e-37 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP000034.1.gene3834. Protein 1e-37 47
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0197 Protein 4e-35 46
GTCCBUS3UF5_30770 YP_004983479.1 response regulator AF155139.2.orf0.gene Protein 6e-44 44
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP001485.1.gene721.p Protein 2e-37 44
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_003923.1003417.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_013450.8614146.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002951.3238224.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_007793.3914065.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002758.1121390.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_010079.5776364.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002952.2859858.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_007622.3794948.p0 Protein 5e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0083 Protein 1e-35 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator FJ349556.1.orf0.gene Protein 2e-42 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_011595.7057856.p0 Protein 2e-37 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_010410.6002989.p0 Protein 2e-37 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_010400.5986590.p0 Protein 1e-37 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator AF162694.1.orf4.gene Protein 2e-38 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0308 Protein 1e-31 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator DQ212986.1.gene4.p01 Protein 2e-42 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_005054.2598277.p0 Protein 3e-41 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_014475.1.orf0.gen Protein 3e-41 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator AM180355.1.gene1830. Protein 2e-41 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator EU250284.1.orf4.gene Protein 2e-41 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP000034.1.gene3671. Protein 8e-38 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP000034.1.gene2186. Protein 1e-35 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_002695.1.916589.p Protein 9e-36 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0039 Protein 1e-35 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP001138.1.gene2239. Protein 4e-35 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0596 Protein 4e-35 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0125 Protein 2e-32 41
GTCCBUS3UF5_30770 YP_004983479.1 response regulator BAC0111 Protein 1e-32 41
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP000675.2.gene1535. Protein 3e-38 41
GTCCBUS3UF5_30770 YP_004983479.1 response regulator HE999704.1.gene1528. Protein 9e-33 41
GTCCBUS3UF5_30770 YP_004983479.1 response regulator CP000647.1.gene2531. Protein 2e-35 41
GTCCBUS3UF5_30770 YP_004983479.1 response regulator NC_008702.1.4607594. Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_30770 YP_004983479.1 response regulator VFG1389 Protein 3e-37 48
GTCCBUS3UF5_30770 YP_004983479.1 response regulator VFG1386 Protein 7e-43 45
GTCCBUS3UF5_30770 YP_004983479.1 response regulator VFG1390 Protein 5e-39 43
GTCCBUS3UF5_30770 YP_004983479.1 response regulator VFG1563 Protein 6e-42 42
GTCCBUS3UF5_30770 YP_004983479.1 response regulator VFG1702 Protein 5e-42 42