Gene Information

Name : GTCCBUS3UF5_23350 (GTCCBUS3UF5_23350)
Accession : YP_004982741.1
Strain : Geobacillus thermoleovorans CCB_US3_UF5
Genome accession: NC_016593
Putative virulence/resistance : Virulence
Product : 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2154326 - 2155609 bp
Length : 1284 bp
Strand : -
Note : similar to 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN of Bacteria UniRef RepID=YIAN_ECOLI

DNA sequence :
ATGGCGTTGGTCGTTTTTATCGGGTCGCTGTTAGGGGTCATGGCGCTCGGGATGCCGATCGCGTTTGCGCTCTTGGTCAG
CGGCGTCGCCTTGATGTTTTATTTGGACATTTTTGATACGCAAATCATCGCGCAAAACTTGATCAGCGGCGCAGACAGCT
TTCCGCTGATGGCGATTCCGTTCTTTATGCTCGCCGGGGAGCTCATGAACGCCGGGGGCATTTCGAAGCGGATCATCCGC
TTTGCGATGGCGCTTGTCGGCCATATCCGCGGTGGGCTCGGGTATGTGGCGATCATCGCGAGCGTGTTGTTCGCCGGGTT
GTCGGGGTCGGCGGTGGCCGATACAGCGGCGCTTGGGGCGATTCTCATCCCGATGATGGTCAAAGCTGGGTACAACCGCA
ACCGCTCAGCCGGCCTTATCGCTGCCGGCGGCATCATCGCCCCGATCATCCCGCCGAGCATTCCGATGATCATTTTTGGG
GTCACAAGCGGCGTGTCGATCACGAAGCTGTTTATGGCCGGCATTGTTCCCGGGATTTTGCTTGGCATTTCACTGGCCAT
CTGCTGGTGGTGGGTGACCCGAAGAGATCAAGTGGAAGTGCTTCCACGTCAGTCGGCGAAAGAGATTTGGCGGGCGACCC
GCGAGGCGTTTTGGGCGCTGCTGCTGCCGGTGATCATTGTCGGCGGGCTGCGCGGAGGGGTGTTTACGCCGACCGAGGCG
GCGGTCGTGGCCGCGTTTTACGCGTTGTTTGTCGGTCTATGCATTTACCGCGAGCTGAAAGTGAAAGACTTGTTCCACGT
GCTCGTGGCCGCGGCGAAAACGACAAGCGTCGTCATGTTTTTGGTGGCCGCCGCCATGGTGTCGGCCTGGCTCATTACAG
TCGCCAACATTCCGTCGATCGTGACAGATGTGCTCGCGCCGCTCATCGACCATCCGCTCGCGCTGCTTTTGGCCATTAAC
GCCTTGGTGCTGTTGGTTGGAACGGCGATGGACTTGACGCCGACAGTGCTCATTTTGACGCCGGTGCTGATGCCGATTAT
TGAAAAAGCGGGAATCGATCCGGTGTACTTCGGGGTATTGTTTATTTTAAACAACTGCATTGGGCTGCTCACGCCGCCGG
TTGGCACGGTGCTGAACGTCGCCTGCGGGGTGGCGAAAATCAACATGGAGGACATCATGAAAGGAGTTTGGCCGTTTTTG
CTGGTGGAGACGCTTCTGTTGCTTCTGTTGATTTTCTTCCCGTCCCTTGTGACTGTGCCGCTTGGGTGGTTTACGGGGCA
TTAA

Protein sequence :
MALVVFIGSLLGVMALGMPIAFALLVSGVALMFYLDIFDTQIIAQNLISGADSFPLMAIPFFMLAGELMNAGGISKRIIR
FAMALVGHIRGGLGYVAIIASVLFAGLSGSAVADTAALGAILIPMMVKAGYNRNRSAGLIAAGGIIAPIIPPSIPMIIFG
VTSGVSITKLFMAGIVPGILLGISLAICWWWVTRRDQVEVLPRQSAKEIWRATREAFWALLLPVIIVGGLRGGVFTPTEA
AVVAAFYALFVGLCIYRELKVKDLFHVLVAAAKTTSVVMFLVAAAMVSAWLITVANIPSIVTDVLAPLIDHPLALLLAIN
ALVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVLFILNNCIGLLTPPVGTVLNVACGVAKINMEDIMKGVWPFL
LVETLLLLLLIFFPSLVTVPLGWFTGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 7e-48 43
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 7e-48 43
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 5e-48 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_23350 YP_004982741.1 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN VFG1110 Protein 3e-48 43