Gene Information

Name : GTCCBUS3UF5_2010 (GTCCBUS3UF5_2010)
Accession : YP_004980630.1
Strain : Geobacillus thermoleovorans CCB_US3_UF5
Genome accession: NC_016593
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 197298 - 198149 bp
Length : 852 bp
Strand : -
Note : similar to ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components COG1120; similar to ABC transporter related protein of Firmicutes UniRef RepID=D3EHQ7_GEOS4

DNA sequence : 
ATGCGCTATAATAATATTGATATTGATTCTCATTTTCTTGATCCGGAAGGAGGTGGCCTCATGGTCCGCCTATACGCCGA
GGAGTTGACCGTCCGCTACGATGACCGGACGATTTTCGAACGCTTATCCGTCCGCATTCCCGACCGACAAATCACAGCCA
TTATTGGACCAAACGGATGCGGAAAATCGACGCTGCTCAAGACGTTGACGCGCATCATTTCCCCGCAGTCCGGCGCCGTC
ATTTTGGACGGCCGGGCCATTTCGCAACAGCCAACGAAAGAACTGGCGAAAAAAATAGCTATTTTGCCGCAGACGCCGGA
AGCGACAAGCGGATTGACCGTCGCTGAGCTCGTCTCGTACGGCCGCTTCCCTTATCAAAGAGGATGGGGCCGCCTAACGA
AACAAGATTACGAAGCAATCGACTGGGCGCTTGCCGTAACGAAAACAGCCGATTTGAAACACCGGCCGGTTGACGCCCTC
TCCGGCGGACAGCGGCAGCGCGTCTGGATCGCCATGGCGCTCGCTCAAGAGACGGACATCATCTTTTTGGACGAACCGAC
GACGTATTTGGACATCGCCCACCAGCTCGAGGTGCTCGAGCTGCTTGAACGGCTGAACAAAGAAGAAGGGCGGACAATTG
TGATGGTGCTCCATGACATTAACCAAGCGGCGCGGTTTTCCGACTATGTGATCGCCATGAAGGCGGGCACGATCGTCAAA
GCCGGGCCGAGCGAAGACGTCATTTGCCGCGATGTGCTTCGCGACGTGTTTGGCATTGACGCTGACATCGGCCGCGACCC
GCGGACGAACAAACCGATTTGCTTCACTTATCAACTGCTTAGGGAGGCTTGA

Protein sequence : 
MRYNNIDIDSHFLDPEGGGLMVRLYAEELTVRYDDRTIFERLSVRIPDRQITAIIGPNGCGKSTLLKTLTRIISPQSGAV
ILDGRAISQQPTKELAKKIAILPQTPEATSGLTVAELVSYGRFPYQRGWGRLTKQDYEAIDWALAVTKTADLKHRPVDAL
SGGQRQRVWIAMALAQETDIIFLDEPTTYLDIAHQLEVLELLERLNKEEGRTIVMVLHDINQAARFSDYVIAMKAGTIVK
AGPSEDVICRDVLRDVFGIDADIGRDPRTNKPICFTYQLLREA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-59 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-60 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-60 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-51 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-51 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-51 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-51 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-52 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-55 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_2010 YP_004980630.1 ABC transporter BAC0164 Protein 3e-55 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_2010 YP_004980630.1 ABC transporter VFG0925 Protein 4e-52 48
GTCCBUS3UF5_2010 YP_004980630.1 ABC transporter VFG1042 Protein 2e-55 44