Gene Information

Name : GTCCBUS3UF5_17030 (GTCCBUS3UF5_17030)
Accession : YP_004982115.1
Strain : Geobacillus thermoleovorans CCB_US3_UF5
Genome accession: NC_016593
Putative virulence/resistance : Virulence
Product : siderophore transport system ATP-binding protein yusV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1593250 - 1594062 bp
Length : 813 bp
Strand : +
Note : similar to ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components COG1120; similar to Probable siderophore transport system ATP-binding protein yusV of Bacteria UniRef RepID=YUSV_BACSU

DNA sequence : 
ATGCATGGGTTGCAGGCGAAAGAGTTGACGCTATCCTATGGCGAGGCGATCGTTATTGACCGTTTAGACTTGACGATTCC
AAAAGGAAAAATCACGGTGTTCATCGGCGCGAACGGCTGCGGCAAGTCGACGTTGCTGCGCGCCTTGGCCCGGCTGCTAA
AACCAACAAGCGGCGCTGTGCTGCTGGATGGAAAAGAAATCGCCAAACAGCCGACAAAAGAAATCGCCCGCCGGCTCGCC
ATTTTGCCGCAGTCGCCTATGGCTCCGGAAGGACTGACCGTGTTGCAACTTGTGAAGCAAGGGCGCTACCCGTATCAAAC
GTGGTTCAAGCAATGGAGTGACGAAGATGAGCGGGCGGTTGTGCGGGCCCTAGAGGCAACTGGACTCGCCGAATTCGCCG
AGCGGCCGGTCGATTCGCTTTCCGGCGGACAGCGCCAACGCGCATGGATCGCCATGACATTAGCGCAAGAAACAGACATC
ATTTTGCTTGACGAGCCGACGACGTATTTGGATCTCGCGCATCAAATTGACATTTTAGATTTATTGTTTGAGCTGAATGA
AAAAGAACGGCGGACGATCGTCATGGTGCTTCACGATTTGAATTTAGCGTGCCGTTACGCCCATCATCTCGTCGCCATTC
GCGATAAAACGGTGTATGCCGAAGGAAAGCCGGAAGACGTCATTTCCCGCCAGCTCGTGAAAGATGTGTTCCAAATGGAT
TGCCAAATCACGTACGATCCGATCTTTGGCACCCCGCTTTGCATTCCGTATGGGAAAGGACGGCGAATTTTACAGAAAGA
AGGCGTATCGTGA

Protein sequence : 
MHGLQAKELTLSYGEAIVIDRLDLTIPKGKITVFIGANGCGKSTLLRALARLLKPTSGAVLLDGKEIAKQPTKEIARRLA
ILPQSPMAPEGLTVLQLVKQGRYPYQTWFKQWSDEDERAVVRALEATGLAEFAERPVDSLSGGQRQRAWIAMTLAQETDI
ILLDEPTTYLDLAHQIDILDLLFELNEKERRTIVMVLHDLNLACRYAHHLVAIRDKTVYAEGKPEDVISRQLVKDVFQMD
CQITYDPIFGTPLCIPYGKGRRILQKEGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-63 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-63 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-62 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-58 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-58 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-58 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-58 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-53 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-53 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_17030 YP_004982115.1 siderophore transport system ATP-binding protein yusV BAC0164 Protein 1e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_17030 YP_004982115.1 siderophore transport system ATP-binding protein yusV VFG0925 Protein 3e-66 52
GTCCBUS3UF5_17030 YP_004982115.1 siderophore transport system ATP-binding protein yusV VFG1042 Protein 1e-53 47