Gene Information

Name : GTCCBUS3UF5_11520 (GTCCBUS3UF5_11520)
Accession : YP_004981568.1
Strain : Geobacillus thermoleovorans CCB_US3_UF5
Genome accession: NC_016593
Putative virulence/resistance : Virulence
Product : negative regulator of genetic competence
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1070932 - 1073064 bp
Length : 2133 bp
Strand : -
Note : similar to ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones COG0542; similar to Negative regulator of genetic competence ClpC/MecB of Firmicutes UniRef RepID=Q4EF65_LISMO

DNA sequence :
ATGCTATGCCAAGCATGCCAACAACGTGAAGCAACAGTGTTTGTCAACTTGCAATGGAACGGGGAAAAACAACAACTTCA
CCTGTGCCATGAATGCTATGAAAAGCAAAAACAACAACTGTCCATTCCGATGAACTTCGGCTTTTCACCGTTTTCCTTTG
ATGACTTCTTTACTAGCCCGTTCACAGCCGCCAACGCCGGAATGAGCGCGCCGAAAACGATGGCGAAGCGCCCGCAAAGC
CATGGCGGTGGATTTTTGGATCAATTCGGCCGCAACTTGACGCAAATGGCGAAAGCGGGCTTGATCGATCCGGTCATCGG
CCGCGACAAAGAAATCGCCCGCGTGATCGAAATTTTAAACCGCCGCAACAAAAACAACCCGGTGTTGATCGGGGAGCCGG
GTGTCGGGAAAACAGCCATCGTTGAAGGGCTCGCGCTGAAAATCGCCGAAGGGCAAGTGCCAGAAAAACTGTTGAACAAA
GAAGTGTACTTGCTTGACGTCGCTTCGCTTGTTGCCAACACCGGCATCCGCGGCCAGTTTGAAGAGCGGATGAAACGGCT
CATCGCCGAATTGCAAGAGCGGAAAAACATCATCTTGTTCATTGACGAAATCCACCTGCTCGTCGGCGCTGGCGCCGCTG
AAGGCTCGATGGACGCCGGCAATATTTTAAAACCGGCGCTCGCCCGCGGGGAACTGCAAGTCGTTGGGGCGACGACACTC
AAAGAATACCGGCAAATTGAAAAAGACGCGGCTCTTGAGCGCCGCTTCCAACCGGTCATCGTCCACGAGCCGACCGTTGA
GGAAGCGATCGCCATCTTAAAAGGCATTCAGCCAAAATATGAACAATTCCATCATGTCCGCTATACGGACGAGGCGATCG
AAGCGTGCGTGAAATTGTCGCACCGCTACATTCAAGACCGCTTCCTCCCGGACAAGGCGATCGACTTGTTGGATGAGGCC
GGCTCGAAAGCGAACTTGCGCCTCGGCCCGACCGATGAAAAGCAACTGCAAGAGCGATTGATCCAAATCGCGAAAGAAAA
AGAACAAGCGGCGAAAGAGGAAAACTATGAACTGGCGGCGAAACTGCGCGCTGAAGAGCTGAAGCTTGAGAAACAACTCG
AGCAAGGCGTCACCCAAGAACGCCCAACAGTCGATGTGGCGGACATCGAGCAAATCATTGCCGAGAAAACCGGCATCCCG
GTCGGCAAACTGCAAGCCGATGAAAAAGAAAAAATGAAACATCTCGAAGAAAACTTGGCGAAAAAAGTGATCGGCCAAGC
GGAAGCGGTGAAAAAAGTCGCCAAGGCGATCCGCCGCAGCCGCGCCGGCTTGAAAGCGAAACACCGCCCGATCGGTTCGT
TCTTGTTTGTCGGCCCGACCGGCGTCGGGAAAACGGAGCTCGCCAAAACGCTCGCTGAAGAGCTGTTTGGCACAAAAGAC
GCCATGATTCGCCTCGATATGAGCGAATACATGGAGAAACATTCGGTCTCGAAGCTGATCGGTTCGCCGCCGGGCTATGT
CGGCTTTGAAGAAGCCGGCCAGCTGACAGAAAAAGTGCGCCGCAATCCGTACAGCATCATCTTGCTCGACGAGATTGAAA
AAGCGCACCCGGATGTACAGCACATCTTCCTGCAAATTTTGGAAGACGGCCGCTTAACCGACAGCCAAGGCCGCACCGTC
AGCTTCAAAGACACCGTCATCATCGCGACAAGCAACGCCGGTGTGACCGACAAAAAAATCACCGTCGGCTTTGAAAAAGA
GGGCAACAGACAAACAAGCGTCCTTGACTCGCTCAGTGCCTACTTCAAGCCGGAATTTTTGAACCGCTTCGACGCCATCA
TCGAGTTTAAGCCGCTCGAAAAAGCGCACTTGCTTGAGATCGTCGACCTGATGCTCGCCGATGTCAAAGCGGCGATGCGC
GAACAAGGCATTGAACTCGAGGTGACCGAAGCGGCGAAAGAAAAACTGGCCGAACTCGGCTACCATCCGGCCTTCGGCGC
CCGCCCGCTCCGCCGCGTCATCCAAGAGCAAGTCGAAGACAACATCGCCGACTGCCTGCTTGACGCGGATCAATCGGTGC
GTGCGATCCGTATCGATGTCAAGGACAATGCCATTGTGGCGGAAATCGCCTAA

Protein sequence :
MLCQACQQREATVFVNLQWNGEKQQLHLCHECYEKQKQQLSIPMNFGFSPFSFDDFFTSPFTAANAGMSAPKTMAKRPQS
HGGGFLDQFGRNLTQMAKAGLIDPVIGRDKEIARVIEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIAEGQVPEKLLNK
EVYLLDVASLVANTGIRGQFEERMKRLIAELQERKNIILFIDEIHLLVGAGAAEGSMDAGNILKPALARGELQVVGATTL
KEYRQIEKDAALERRFQPVIVHEPTVEEAIAILKGIQPKYEQFHHVRYTDEAIEACVKLSHRYIQDRFLPDKAIDLLDEA
GSKANLRLGPTDEKQLQERLIQIAKEKEQAAKEENYELAAKLRAEELKLEKQLEQGVTQERPTVDVADIEQIIAEKTGIP
VGKLQADEKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELAKTLAEELFGTKD
AMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTV
SFKDTVIIATSNAGVTDKKITVGFEKEGNRQTSVLDSLSAYFKPEFLNRFDAIIEFKPLEKAHLLEIVDLMLADVKAAMR
EQGIELEVTEAAKEKLAELGYHPAFGARPLRRVIQEQVEDNIADCLLDADQSVRAIRIDVKDNAIVAEIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-155 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_11520 YP_004981568.1 negative regulator of genetic competence VFG0080 Protein 0.0 65
GTCCBUS3UF5_11520 YP_004981568.1 negative regulator of genetic competence VFG0079 Protein 3e-155 53