Gene Information

Name : GTCCBUS3UF5_10780 (GTCCBUS3UF5_10780)
Accession : YP_004981495.1
Strain : Geobacillus thermoleovorans CCB_US3_UF5
Genome accession: NC_016593
Putative virulence/resistance : Resistance
Product : Two component transcriptional regulator, winged helix
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1006676 - 1007350 bp
Length : 675 bp
Strand : -
Note : similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain COG0745; similar to Two component transcriptional regulator, winged helix family of Geobacillus UniRef RepID=D7D171_9BACI

DNA sequence :
ATGACACGAATTTTAATCGTCGATGATGACGCGCATATCCGCGAACTCGTCAGCCACTTTTTAAACTTAGAAGGATTTAC
AATCCATGAGGCGGCTAACGGAAAAGAAGCACTTGACGTATTGGAAACAGTGAAAGTGGATTTGGTCATTATGGATATTA
TGATGCCGGAAATGGATGGTTGGGAGCTATGTCGCGAACTGCGCGACTACGACGATGTCCCCATTTTAATGTTGACGGCC
AAAGGGGAAACAAGACAGAAGGTGAAAGGATTCGAGCTCGGGGCGGACGATTATCTTGTCAAACCGTTCGACCCACTTGA
GCTCGTCGCCCGGGTCAAAGCATTGCTCAAACGGTATCGAATCGCTACATCGCAAATCGTACAAATAGGCCGTTTATCGT
TAAACCGCAAGACGTACGAATGCCGTTTGGGAGACCAAGAGATCTTCTTGCCGCCGAAAGAATTTGAACTGCTTTTTAAA
TTGGCCAGCTATCCGGGCAAAACGTTTACACGCGACGAGTTGATTGAACAGATCTGGGGCTACGATTATGATGGGGATGA
ACGAACAGTGGATGTGCATATCAAACGATTGCGCGAACGGTTTGCCCAACCAGATTCTCCATTTTCCATCCGCACGATTC
GCGGGCTCGGCTATCGGTTGGAGGCACAGTCATGA

Protein sequence :
MTRILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWELCRELRDYDDVPILMLTA
KGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIATSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFK
LASYPGKTFTRDELIEQIWGYDYDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEAQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-37 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_012469.1.7685629. Protein 1e-41 46
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_012469.1.7686381. Protein 2e-38 44
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix AE000516.2.gene3505. Protein 5e-38 44
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix HE999704.1.gene2815. Protein 4e-42 43
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix AF310956.2.orf0.gene Protein 8e-38 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix AM180355.1.gene1830. Protein 2e-38 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_002952.2859905.p0 Protein 5e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_002951.3237708.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_002758.1121668.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_009641.5332272.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_013450.8614421.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_007622.3794472.p0 Protein 5e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_007793.3914279.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_003923.1003749.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_002745.1124361.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix NC_009782.5559369.p0 Protein 4e-40 42
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix U35369.1.gene1.p01 Protein 5e-36 41
GTCCBUS3UF5_10780 YP_004981495.1 Two component transcriptional regulator, winged helix AE016830.1.gene2255. Protein 5e-36 41