Gene Information

Name : BYI23_C003640 (BYI23_C003640)
Accession : YP_004978948.1
Strain :
Genome accession: NC_016590
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 417863 - 419725 bp
Length : 1863 bp
Strand : +
Note : -

DNA sequence :
ATGAACCCCGACCTCATCCAGTACTACAGCCGCGAATTGCAGCATATCCGCGAAATGGGCGGCGAATTCGCGCAGGCGTT
TCCGAAGATCGCGGGACGGCTGGGCCTCGAAGGCTTCGAATGCGCCGATCCTTACGTCGAGCGTCTGCTGGAAGGTTTCG
GCTTTCTCGCCGCCCGCGTCCAGATGAAGATCGATGCGGAGTTTCCACGCTTCACGCAGCATCTGGCGGAACTGGTCTAT
CCGCATTATTTGGCGCCTACGCCGGCGATGACCGTCGTGCACGTGCAGCCTGACATGACGCATCCCGCGCTCGCCGAGGG
CGTGCCCGTGCCGCGCGGCACCGCCTTGCACGGCCGGCTCGACGGTGAACGCGCGACGCGTTGCGAATTCCGCACTGCGC
ATGGGTTGACGCTGTGGCCCATCGAACTGTCGGCGGCGCGGCTCTTCACGCATACCGGCGCGATGCCGGGCATCGAAGCG
CGCCTGCCTCGCGGCGTGAAGGCGGGCCTGCGTCTGACCTTGCGCGCGTCCGGCGGGCGCAAGCTGCGCGACCTCGCGAT
CGATCGTCTGCCCATGTATTTGCGCGGCAACGATGGCGTCGCCGCGAAGCTCTACGAGTTGCTGGTTGGCTCGACGCTCG
GCGTCGTGGCGGGCGATGCGGTGCTGCCGGCCTCCGCGCTGCGCCCGCTCGGTTTCAGCGATGAGGAAGCGTTGCTGCCC
GTGAGCGAGCAATCGTTTCCGGGATATCGGCTGCTGCAGGAGTATTTCGCCTGCCCGCAGCGTTTCATGTTCATCGGTAT
CGAGGGACTGCGTGCTCAACTGGCGCGCTGCGACAAGAGCGAGATCGAGCTGGTCGTGCTGCTGTCGCGCGCGGACACCG
CGCTGGAACAGGTCGTCGATCAGGCGAATTTCGCGCTGCATTGCACGCCCGCGATCAATCTGTTCCCGCGCCGCGCCGAT
CGCATTGCCGTGACGGGCGAGCAGTTCGAACATCACGTGGTCGTCGATCGCACGCGGCCCCGCGATTTCGAGGTGGTCCG
CATTCAGGGCGTGACGGGATATCGTGCGGGCGGCGGCGAGATCGCATTCCAGCCGTTCTACCGCATGCGCGATCTCGGTA
TCGACGAGCCCGATGCCGCGTTCTATCAGGTGCGTCGCGAGAAGCGTCTGCCGTCGGCGCGCGAGAACGAGCGCGGCGTC
CGGTCTGCCGCGCGTTCCTCCTATGCGGGCAGCGAAACGTGGATTGCGCTCGTGGACACGCGCGAGTCGCCTTATCCCGC
CGATCTTCATCAGCTCGGCATCAGCGTGCTGTGCACCAACCGCGATCTCACGCTGACCATGCCCCTCGGACGCGGCGAGA
CCGACTTCACGCTGGAACTCGAAGCGCCCGTCGCGGCCGTGCGCTGCGTGGCCGCGCCGAGCCGTCCGTTGCCTTCATAC
GCGCAGGGCGCGGTCGCGTGGCGGCTGCTGAGCCATCTGTCGCTGAACCACGGCTCCCTCGTGGACGATGCCGACGGCAG
CGGCGCACGCGCCATGCGCGATCTGCTCGCGCTCTACGCACCCGAAGGCGACAGCGCGGCCGCGCGTCAGATCGATGCAC
TGCGCTCGATTCGCTCGAACGCGGTCACGCGCCGGTTGCCCTCGCGCGGCCCGATCGTATTCGGGCGCGGCCTCGCACTC
GACGTGCTGCTCGACGAGAGCGGATTCGAAGGCGCGAGCGCGTTTCTGTTCGGCGCGGTGCTCGCGCGCTTCTTCGAGCA
ATACGTCTCGTTGAACGCCTTCACGGAAACCATCGTGTCGTCGGTGACGCGCGGTGAAATCATGCGCTGGGCGCCGGAGA
GCGGACGATGCCGGACGCTGTGA

Protein sequence :
MNPDLIQYYSRELQHIREMGGEFAQAFPKIAGRLGLEGFECADPYVERLLEGFGFLAARVQMKIDAEFPRFTQHLAELVY
PHYLAPTPAMTVVHVQPDMTHPALAEGVPVPRGTALHGRLDGERATRCEFRTAHGLTLWPIELSAARLFTHTGAMPGIEA
RLPRGVKAGLRLTLRASGGRKLRDLAIDRLPMYLRGNDGVAAKLYELLVGSTLGVVAGDAVLPASALRPLGFSDEEALLP
VSEQSFPGYRLLQEYFACPQRFMFIGIEGLRAQLARCDKSEIELVVLLSRADTALEQVVDQANFALHCTPAINLFPRRAD
RIAVTGEQFEHHVVVDRTRPRDFEVVRIQGVTGYRAGGGEIAFQPFYRMRDLGIDEPDAAFYQVRREKRLPSARENERGV
RSAARSSYAGSETWIALVDTRESPYPADLHQLGISVLCTNRDLTLTMPLGRGETDFTLELEAPVAAVRCVAAPSRPLPSY
AQGAVAWRLLSHLSLNHGSLVDDADGSGARAMRDLLALYAPEGDSAAARQIDALRSIRSNAVTRRLPSRGPIVFGRGLAL
DVLLDESGFEGASAFLFGAVLARFFEQYVSLNAFTETIVSSVTRGEIMRWAPESGRCRTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 8e-115 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_C003640 YP_004978948.1 type VI secretion protein VFG2074 Protein 1e-147 53