Gene Information

Name : BYI23_C011010 (BYI23_C011010)
Accession : YP_004979685.1
Strain :
Genome accession: NC_016590
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1293142 - 1294221 bp
Length : 1080 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGATCGTTACGAATCGGTCCGCCAGCAACTGCAGCGCAATCCGCAGAAATGGCTGATTACCGGCGTCGCCGGGTT
CATCGGCTCGAATCTGCTCGAAGCGCTCCTCAAGCTGGACCAGGAAGTCGTCGGGCTCGACAACTTCGCCACCGGCCATC
AGCGCAATCTGGACGAAGTGCGCTCGCAAGTGAGCCCCGCGCAATGGGGCCGCTTCAGCTTAGTCGTTGGCGATATCCGC
AACCTCGACGACTGCCGCGCCGCCGTGAAGGGCGCCGCGCACGTGCTGCACGAAGCGGCGCTCGGCTCGGTGCCGCGCTC
CGTGAACGATCCGATCACGACGCACGAAGTGAATATCAGCGGCTTTCTGAACATGCTCGTCGCCGCGCGCGACGCCAAGG
TGGAAAGCTTCACCTATGCGGCGTCCAGCTCGACCTACGGCGACCATCCGGGCCTGCCGAAAGTCGAGGACCGCATCGGC
CAGCCGCTGTCGCCGTATGCGGTGACGAAGTACGCCAACGAGCTGTATGCGTCCGTTTTCGCGCGCACCTACGGCCTGAA
CGCGATCGGCCTGCGCTACTTCAACGTGTTCGGCAAGCGCCAGGACCCGGACGGCGCGTATGCGGCGGTGATCCCGAAGT
GGACCGCCGCGCTCATCGACGACGAACAGGTCACGATCAACGGCGACGGCGAAACGAGCCGCGATTTCTGCTTCATCGAC
AACGTTGTGCAGATAAACATCCTCGCCGCGATGTCCGATGCGAACGCGCGCAATCAGGTCTACAACGTCGCGGTCGGCGA
CCGCACGACGCTCAATCAGCTTTACGACGGCCTGAAGCGCGTGCTCGCCGACAACGGCGTGGTGAACGAAGGCAGCGCCG
TCTATGCGCCGTTCCGCGCGGGCGACGTGCGCCACTCGCAGGCCAACGTCGACAAGGCCGCGCAGCTGCTCGGCTACGCC
AGCGCCATTCCGCTCGCCGACGGTCTCGCGATCGCGATGCCGTGGTACATCCGCTTCCTGTCGGGGCGGCGCGTGCCGGC
TGAACAGATCGAAGCCGACGTGGCGACGAGGGCCGCATGA

Protein sequence : 
MSDRYESVRQQLQRNPQKWLITGVAGFIGSNLLEALLKLDQEVVGLDNFATGHQRNLDEVRSQVSPAQWGRFSLVVGDIR
NLDDCRAAVKGAAHVLHEAALGSVPRSVNDPITTHEVNISGFLNMLVAARDAKVESFTYAASSSTYGDHPGLPKVEDRIG
QPLSPYAVTKYANELYASVFARTYGLNAIGLRYFNVFGKRQDPDGAYAAVIPKWTAALIDDEQVTINGDGETSRDFCFID
NVVQINILAAMSDANARNQVYNVAVGDRTTLNQLYDGLKRVLADNGVVNEGSAVYAPFRAGDVRHSQANVDKAAQLLGYA
SAIPLADGLAIAMPWYIRFLSGRRVPAEQIEADVATRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 8e-103 61
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 8e-103 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_C011010 YP_004979685.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 3e-103 61