Gene Information

Name : BYI23_C010990 (BYI23_C010990)
Accession : YP_004979683.1
Strain :
Genome accession: NC_016590
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1290569 - 1291843 bp
Length : 1275 bp
Strand : +
Note : -

DNA sequence :
ATGTTCTCGCCGCATGAGTTGAAAATCGGTGTCGTGGGTCTGGGCTACGTCGGCCTGCCGCTCGCGGTGGAATTCGGCAA
GCGTCATCCGGTCGTCGGATTCGACATCAACCGCGCGCGCATCGGCGCGCTGCGCGAAGGCCGCGACGTCACGCTCGAAG
TCGATGACGAAGAACTCGCCTCCGCCACCCTGATGCAGTACAGCGCCGATGTCGAGGATCTGCGCGGCTGCACCGTTTTC
ATCGCCACGGTGCCGACGCCGATCGACCACTACAAGCGTCCGGACCTGTCGCCGCTGATCAGCGCATCGACGACCATCGG
CAGCGTGCTGAAAAAGGGCGATGTCGTCATCTATGAATCGACCGTTTATCCCGGCGCGACCGAAGAAGAATGCGTGCCGG
TCCTGGAAAAGATGTCCGGCCTGAAGTTCAACGAGGATTTCTTCGTCGGCTACAGCCCCGAGCGGATCAATCCGGGCGAC
AAGTCGCACCGCCTGCCGGACATCAAGAAGGTGACGTCCGGCTCGACGCCCGAAGTGGCCGATTTCGTCGATGAACTGTA
TCGCGGCATCATCACGGCGGGCACGCACAAGGCGAGCAGCATCCGCGTGGCCGAGGCGGCCAAGGTGATCGAGAACACGC
AGCGCGACGTCAATATCGCGCTGATCAACGAACTGTCGATCATCTTCAACAAGATGAATATCGACACCGAATCCGTGCTG
CTCGCGGCGGGCACGAAGTGGAACTTCATTCCGTTCCGTCCGGGTCTGGTCGGCGGCCACTGCATCGGCGTGGACCCGTA
CTATCTGACGCACAAGGCGCAGGCAATCGGCTATCACCCGGAGATCATCCTCGCGGGGCGGCGCCTGAACGACAGCATGG
GCAACTATGTGGTGTCGCAGCTCGTTAAAACCATGACCAAGCGCGACATCGCCATTTCGGGCGCGCGCGTGCTGATCATG
GGCCTCACCTTCAAGGAGAACTGCCCGGACCTGCGCAACACGCGCGTGGTCGACATCATCGCCGACCTCAAGGAATACGG
CGTTCAGGTGGACGTGTACGACCCGTGGGTCTCGAAGGAAGAGGCGCATCACGAGTACGGCATCGACCCGATCGAGCCGG
CCAAGGGCGTCTACGACGCGATCGTGCTCGCCGTGGCGCACAAGCAGTTCGCCGACGAGGGCGCGGAGGGCATCCACGCC
TACGGCAAGTCGCAGCACGTGCTGTGCGACCTGAAGTACGTGCTCCCGCCCGAAGCGAGCGACATGCGTCTCTGA

Protein sequence :
MFSPHELKIGVVGLGYVGLPLAVEFGKRHPVVGFDINRARIGALREGRDVTLEVDDEELASATLMQYSADVEDLRGCTVF
IATVPTPIDHYKRPDLSPLISASTTIGSVLKKGDVVIYESTVYPGATEEECVPVLEKMSGLKFNEDFFVGYSPERINPGD
KSHRLPDIKKVTSGSTPEVADFVDELYRGIITAGTHKASSIRVAEAAKVIENTQRDVNIALINELSIIFNKMNIDTESVL
LAAGTKWNFIPFRPGLVGGHCIGVDPYYLTHKAQAIGYHPEIILAGRRLNDSMGNYVVSQLVKTMTKRDIAISGARVLIM
GLTFKENCPDLRNTRVVDIIADLKEYGVQVDVYDPWVSKEEAHHEYGIDPIEPAKGVYDAIVLAVAHKQFADEGAEGIHA
YGKSQHVLCDLKYVLPPEASDMRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-136 65
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-136 65
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-105 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_C010990 YP_004979683.1 nucleotide sugar dehydrogenase VFG0431 Protein 5e-137 65