Gene Information

Name : BYI23_A026900 (BYI23_A026900)
Accession : YP_004978505.1
Strain :
Genome accession: NC_016589
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3053833 - 3054276 bp
Length : 444 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGAAAATCGTGCGACTACTCGCGATATGCGGGCCGCTTCTGGCGGCGGCGTCGGCACACGCGGACTGCTTCGACGA
AGCGGCGAAGTATCAGAAGGTCAATCCGCTCATCCTTCGTGCCATCGCCTGGCAGGAATCGCACAACAAGCCCGACGCCG
TCAACAAGAACGCCAACGGCTCGACCGACTACGGGCTGATGCAGATCAACTCCATTCATCTCGGCACGCTGGCTCAGTAC
GGCATTTCGAGCGGCACGCTCATGGAGCCATGCAAGAGCGTCTATGTCGCCGCATGGCATCTGCGCCAGAAGATGAACAA
GTATGGCAATTCCTGGCAGGCCGTCGGTGCTTACCATTCCGAAACACCCGCGCTGCGCGACAAGTACTCGTCGCAGATCA
TTGAGATCCTGCGCCGCTGGAAACTGCTCCAGGCCACACGCTGA

Protein sequence : 
MKKIVRLLAICGPLLAAASAHADCFDEAAKYQKVNPLILRAIAWQESHNKPDAVNKNANGSTDYGLMQINSIHLGTLAQY
GISSGTLMEPCKSVYVAAWHLRQKMNKYGNSWQAVGAYHSETPALRDKYSSQIIEILRRWKLLQATR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 6e-35 68
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 3e-35 68
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 3e-35 68
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 9e-35 67
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 3e-35 64
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 2e-35 64
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 4e-15 46
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 3e-15 46
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 3e-15 46
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 3e-15 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_A026900 YP_004978505.1 lytic transglycosylase VFG1789 Protein 5e-19 48
BYI23_A026900 YP_004978505.1 lytic transglycosylase VFG0539 Protein 9e-16 46
BYI23_A026900 YP_004978505.1 lytic transglycosylase VFG0994 Protein 2e-11 44