Gene Information

Name : BYI23_A025270 (BYI23_A025270)
Accession : YP_004978342.1
Strain :
Genome accession: NC_016589
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2853650 - 2854321 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence :
ATGCGCATTCTGCTAATAGAAGACGAGCCGAAGATGACGTCCTATCTTCGGAAGGGGCTTACTGAGGCCAGCTATACCGT
CTACATTGCTGACAATGGAGAAGACGGTCTCTTTCTCGCGCTCAACGAGGACTTCGACCTTATCGTCCTGGACATCATGC
TGCCCGGTATCGATGGCCTGAAGGTCCTGAAGGGACTGCGCAAGCAGAAAGAAACGCCTGTGTTGCTGCTGACAGCGCGC
GACACGGTCGATGACAAAGTCGAGGGACTAGAAGCCGGCGCCGACGACTATCTATCCAAGCCCTTCGCGTACGCCGAGCT
ACTGGCGCGCATACGTTCCCTGCTTCGCCGCGCACCTCGCGCAGTGAAGGACATTCTCCGCATCGGAGACCTCGAAGTCG
ACCTTATCAAGCGGCGCGTGCGACGCGGGGATGCCCGGCTGGAATTGACTGCGCAGGAGTTCGCGTTGCTCCAACTTCTC
GCCGAGCGGCAGGGGGAAGTCCTGACGCGACAGTTCATCACCTCCCAAATCTGGGATATGAACTTCGACAGCGATACGAA
CGTCGTCGATGCTGCAGTTAAGCGCTTGCGCGCCAAAATCGATAACACATATAGCAACAAGCTCCTGCACACCGTACGGG
GCATGGGTTACGTACTCGAGGACCGGTCGTGA

Protein sequence :
MRILLIEDEPKMTSYLRKGLTEASYTVYIADNGEDGLFLALNEDFDLIVLDIMLPGIDGLKVLKGLRKQKETPVLLLTAR
DTVDDKVEGLEAGADDYLSKPFAYAELLARIRSLLRRAPRAVKDILRIGDLEVDLIKRRVRRGDARLELTAQEFALLQLL
AERQGEVLTRQFITSQIWDMNFDSDTNVVDAAVKRLRAKIDNTYSNKLLHTVRGMGYVLEDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-42 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-41 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family BAC0197 Protein 1e-48 61
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family BAC0083 Protein 1e-44 60
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family BAC0125 Protein 3e-49 59
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family BAC0638 Protein 3e-44 58
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family BAC0111 Protein 6e-44 56
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family BAC0308 Protein 1e-40 54
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family BAC0347 Protein 8e-39 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family VFG0596 Protein 1e-42 55
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family VFG1389 Protein 1e-22 43
BYI23_A025270 YP_004978342.1 two component heavy metal response transcriptional regulator, winged helix family VFG1390 Protein 4e-27 42