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Name : capD (BYI23_A020560) Accession : YP_004977871.1 Strain : Genome accession: NC_016589 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : - COG ID : - EC number : - Position : 2312570 - 2314474 bp Length : 1905 bp Strand : - Note : - DNA sequence : ATGAATCGAATAAAAGCATCGTGGCTGTCGGCGGGGGCATTCTTCTTCGATCTGGTGGCGGTCGCCGGGTCATGGCTCGC CGCCTATGTGATCCGCTTCAACGGGGCCGTGCCGCAGGATTTCCGCCACGGCGCGCTCATGGCGCTCTTCTGGGTGCTGC CGGTCTACGGCATCGTGTTCCGCGTCTTCGGCCTTTATCGCGGCATGTGGGTGTTCGCGAGCCTGCCGGACCTGATGCGC ATCTCCAAGTCCATCGTGGTGGGCGCGCTCGTGGTCATGGTGGGCGCGGTGATGTCGCAGCCCATGCCGATCATCCCGCG CTCGGTGCTGATCGTCTCGCCGCTTTTGCTGTTCCTCGCGATGGGCGGCGCGCGCGCGCTTTATCGGGCGGGCAAGGAGT TCTATCTGTACGGCGGGCTCGTCGGCCAGGGCAAGCCCGTGATCGTGCTCGGCGCGGGCACGGCGGGCGCGATGCTCGCG CGCGAGCTGGCGCGTTCGAGCGAATGGCGTCTCGTCGGCCTGCTCGACGACGATCCCGCGAAGCAGGGCCGCGAAGTGCT CGGGCACAAGGTACTCGGCTCGTTCGGCGATTTGCCGCGCTTTGCCGAGCAACTGAAGACGGATTACGTGATCATCGCGA TTCCGTCGGCCTCGGTGGCCGAGCAGCGGCGCGTGGCCACGCTGTGCGTGCGCGCCGGCGTCAAGGTGATGGTGCTGCCC GCGCTCTCGCCGCTCACCGAAGGCACGAACTTTCTGTCGCGCGTGCGCCAGATCGATCTCGAAGATTTGCTCGGCCGCGA GCCGGTGAAGATCGACATGCCGCACGTCGAGCAACTGCTGCACGGGCGCGTGGTGATGGTGACGGGCGGCGGCGGCTCGA TCGGCTCGGAACTCTGCCGCCAGATTCTGCGCTTCTCGCCGGCGCAACTAATCGCCTACGATCTCTCCGAATACGCGATG TACCGGCTCATCGAAGAGCTGCACGAGAAGTTTCCGGAGTGCTCGGTGATCCCGGTCGTCGGCGATGCCAAGGATTCGCT GCTGCTCGATCAGACCATGGCGCGCTTTACGCCGCACATCGTTTTCCATGCGGCAGCCTACAAGCACGTGCCGCTGATGG AAGAGCAGAACGCGTGGCAGGCGGTACGCAACAACGTGCTCGGCACGCTGCGCGTCGCGCGCGCGGCGATCCGCCACGAC GTGCGCCATTTCGTGCTGATCTCCACCGACAAGGCCGTCAACCCGACCAACGTGATGGGCGCCTCCAAGCGTCTCGCCGA GATGGCCTGTCAGGCGCTGCAGCAGTCCGCGCCGCGCACGCAGTTCGAAACCGTGCGCTTTGGCAACGTGCTCGGCAGCG CGGGCAGCGTGATTCCGAAGTTCCAGCAGCAGATCGCGAAGGGCGGTCCGGTGACAGTCACGCATCCGGAAATCACACGC TTCTTCATGACGATTCCCGAGGCCGCGCAACTGGTGCTGCAGGCGTCGAGCATGGGGCGCGGCGGCGAAATCTTCATTCT CGACATGGGTCAGCCCGTGAAGATCGTCGATCTCGCGCGCGACCTGATTCGTCTCTACGGCTTCTCGGAAGAGCAGATTC GCATCGTGTTCACGGGTTTGCGGCCGGGCGAAAAGCTGTACGAAGAACTGCTGGCGGACGACGAAACCACCACGCGCACG CCGCATCCGAAGCTGCGCATCGCGCAGGCGCGCGGCGTGCCGGATCATTTCATCGACGAACTGCTGCCGTGGCTCATGCA GCATCGCGTGTTGTCGGACGACGAAGTGCGCCGCGACCTGCGCCGCTGGGTGCCGGAGTATCAGACGGCGGCATTGCCCG TGCTGCAGAGCGTGGCGAGCGCGCAAGCCGCGCAGACGGCGCGCCAGCACGGCGCGGCGGGCTGA Protein sequence : MNRIKASWLSAGAFFFDLVAVAGSWLAAYVIRFNGAVPQDFRHGALMALFWVLPVYGIVFRVFGLYRGMWVFASLPDLMR ISKSIVVGALVVMVGAVMSQPMPIIPRSVLIVSPLLLFLAMGGARALYRAGKEFYLYGGLVGQGKPVIVLGAGTAGAMLA RELARSSEWRLVGLLDDDPAKQGREVLGHKVLGSFGDLPRFAEQLKTDYVIIAIPSASVAEQRRVATLCVRAGVKVMVLP ALSPLTEGTNFLSRVRQIDLEDLLGREPVKIDMPHVEQLLHGRVVMVTGGGGSIGSELCRQILRFSPAQLIAYDLSEYAM YRLIEELHEKFPECSVIPVVGDAKDSLLLDQTMARFTPHIVFHAAAYKHVPLMEEQNAWQAVRNNVLGTLRVARAAIRHD VRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQSAPRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPEITR FFMTIPEAAQLVLQASSMGRGGEIFILDMGQPVKIVDLARDLIRLYGFSEEQIRIVFTGLRPGEKLYEELLADDETTTRT PHPKLRIAQARGVPDHFIDELLPWLMQHRVLSDDEVRRDLRRWVPEYQTAALPVLQSVASAQAAQTARQHGAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-92 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-90 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_004977871.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 3e-93 | 45 |
| capD | YP_004977871.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-82 | 44 |
