Gene Information

Name : gacE (BYI23_A011260)
Accession : YP_004976941.1
Strain :
Genome accession: NC_016589
Putative virulence/resistance : Virulence
Product : quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1270852 - 1271190 bp
Length : 339 bp
Strand : +
Note : -

DNA sequence :
ATGCGCTCAACCGCTTATGTGCTCCTCGCCATCGCGATCGTCGCGGAAGTCATCGCGACGTCCGCGCTGCGCGCCTCCGA
TGGCTTCACGCGCGCGCTTCCCGCAGCCATTGTCGTGGTCGGATACGGGCTGTCGTTTTATCTGCTGTCGCTGACACTGC
GCGCGCTGCCCGTCGGCATCGTGTATGCGGTGTGGTCGGGCGCGGGCATCGTGCTCATCACGCTCGTCGCCGCGCTGCTC
TTCAAGCAGACGCCCGATTTGCCCGCCATGTTCGGCATGGGCCTCATCGTCGCGGGCGTCGTCGTGCTCAATGCGTTCTC
GAAAATGAGCGCGCACTGA

Protein sequence :
MRSTAYVLLAIAIVAEVIATSALRASDGFTRALPAAIVVVGYGLSFYLLSLTLRALPVGIVYAVWSGAGIVLITLVAALL
FKQTPDLPAMFGMGLIVAGVVVLNAFSKMSAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0322 Protein 1e-20 60
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0324 Protein 8e-21 60
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE NC_010410.6003348.p0 Protein 7e-22 57
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0002 Protein 7e-22 57
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0377 Protein 9e-20 53
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE CP004022.1.gene1549. Protein 2e-18 51
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0192 Protein 5e-18 50
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE NC_002695.1.913273.p Protein 1e-14 49
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0150 Protein 1e-14 48
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE CP001138.1.gene1489. Protein 1e-18 48
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0329 Protein 3e-12 45
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0325 Protein 3e-12 44
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0139 Protein 6e-15 43
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0140 Protein 3e-13 42
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE BAC0326 Protein 9e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacE YP_004976941.1 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE VFG1586 Protein 1e-17 42