Gene Information

Name : AZOLI_p40038 (AZOLI_p40038)
Accession : YP_004975030.1
Strain :
Genome accession: NC_016587
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transport system, large permease component (DctM-like)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 36499 - 37776 bp
Length : 1278 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
ATGACCCTGACCATTTTCCTGGGCTCGCTGTTCGGCCTGATGCTGCTCGGCATGCCCATCGCCTTCGCGCTGATGCTGAC
CGGCGTCGCGCTGATGGTTCACCTGGATTTCTTCGACGCCCAGCTGGTCGCCCAGAACATGCTGAGCGGCGCCGACAACT
ACCCGCTGATGGCGGTGCCCTTCTTCATCCTGGCCGGCGAGCTGATGAATGCCGGCGGCATTTCCCAGCGCATCATCAAC
CTCGCGGTCAGCCTCGTCGGCCACATCAAGGGCGGGCTGGGATACGTCACCATCGGCGCCTCGGTGATGCTGGCCAGCCT
GTCGGGATCGGCCATCGCCGACACCGCCGCGCTCGCCACGCTGCTGATCCCGATGATGCGCGACCATGGCTATCCGGTGC
CGCGCTCGGCCGGGCTGATCGCATCGGGGGGCATCATCGCCCCGATCATCCCGCCCAGCATGCCCTTCATCATCTTCGGC
GTGACCACCAACACCTCGATCAGCTCGCTGTTCATGGCCGGCATCGTGCCCGGCCTGCTGATGGGCATCGGTCTGGTCTG
CGCCTGGATGTTCGTCGTCCGCGACATGACGGTGAAGCTGCAGCCGAAGGCGAGCGGGCGGGAGCGGCTGAAGGCGCTGG
GCGACGGCATCTGGGCACTGGCCCTGCCGGTCATCATCATCGGCGGCCTGCGCGGCGGCATCTTCACGCCGACCGAGGCC
GCGGTGGTCGCCGCCGTCTATTCGCTGTTCGTCGCGCTGTTCGTCTACCGGCAGGTCACGCTGGCGCAGCTGGTGCCGCT
GCTGGTCCAGGCGGCGCGCACCACCAGCACCGTGATGTTCCTGTGCGCCGCGGCGCTGGTGTCGTCCTACATGGTGACGC
TGGCCGACCTGCCGCAGCAGATGACGGAGCTGCTGGCGCCGCTGATGGACAATCCGAAGCTGCTGATGCTGGCCATCGCC
TGCCTGCTGCTGGCCGTCGGCACGGTGATGGACCTGACGCCGACCATCCTGGTGCTTGGCCCGGTGCTGACGCCGCTGGC
GATCAAGGCCGGCATCGACCCCGCCTATTTCGGCGTGATGTTCGTCCTGGTCGGCACGCTGGGCCTGATCCATCCGCCGG
TCTGCACGGTGCTGAACGTGGTGTGCGGCGTCGCCCGCATCTCGCTGGAAAGCGCCACCAAGGGAATCTGGCCCTTCCTG
CTGACCTACATCGTGCTGCTCGGCCTGCTGATCGCCGTGCCGGAGATCGTCACCGCGCCGCTGCATTTCTTCCACTGA

Protein sequence :
MTLTIFLGSLFGLMLLGMPIAFALMLTGVALMVHLDFFDAQLVAQNMLSGADNYPLMAVPFFILAGELMNAGGISQRIIN
LAVSLVGHIKGGLGYVTIGASVMLASLSGSAIADTAALATLLIPMMRDHGYPVPRSAGLIASGGIIAPIIPPSMPFIIFG
VTTNTSISSLFMAGIVPGLLMGIGLVCAWMFVVRDMTVKLQPKASGRERLKALGDGIWALALPVIIIGGLRGGIFTPTEA
AVVAAVYSLFVALFVYRQVTLAQLVPLLVQAARTTSTVMFLCAAALVSSYMVTLADLPQQMTELLAPLMDNPKLLMLAIA
CLLLAVGTVMDLTPTILVLGPVLTPLAIKAGIDPAYFGVMFVLVGTLGLIHPPVCTVLNVVCGVARISLESATKGIWPFL
LTYIVLLGLLIAVPEIVTAPLHFFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 1e-38 43
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-38 43
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_p40038 YP_004975030.1 TRAP dicarboxylate transport system, large permease component (DctM-like) VFG1110 Protein 7e-39 43