Gene Information

Name : AZOLI_p20676 (AZOLI_p20676)
Accession : YP_004974927.1
Strain :
Genome accession: NC_016586
Putative virulence/resistance : Virulence
Product : Two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 672098 - 672769 bp
Length : 672 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 9044283, 10570969, 16332814; Product type r : regulator

DNA sequence : 
TTGCGCGTTCTGGTCGTCGAGGACGATGCGGCTGTCAGCTACTGGATCGGGGCCAAGCTCAACGGCTCCGGCCATTCCTG
CCGCTTCTCCGGCGACGGCGAGGAGGCGCTGCGCCTGCTGGCGGAAGAGGCGTTCGACGTCGTCGTGCTCGACCGCATGC
TGCCGAAGCTCGACGGGATGGAGGTGCTGAAGCGGCTGAACGGCACGCGCCATCCGCCGGTTCTCGTGCTGTCGGCGCTG
GACGAGACCTCCGACCGGGTGGCCGGGCTGCGCGCTGGGGCCGACGATTACCTGGGCAAGCCCTTCGACTTCGCCGAGCT
GCTGGTGCGGCTGGAGCATCTGTCCCGCCGCCATGGGCAGGCGATGGCGGCTCCCGGCGACCTGCTGACCGTCGGCGATC
TGGTGATGGACGTGGCCCAGCGGCGGGTGACGCGGCAGGGGGTGCCCATCGAACTGACCGACAAGGAATTCCGCCTGCTG
CACATCCTGATGAGCAATCCCGGCCAGACGGTGACCCGGACCATGCTGCTGGAAAAGGCCTGGGGCTACGGCTTCAACCC
GCCGACCAATCTGGTGGAGGTGCATGTCTTCAAGCTGCGCAGCAAGATCGACAAGGACTTCGATCCGCCCCTGCTGCGCA
CCGTGCGGGCGATCGGCTATGCGCTTGGTTGA

Protein sequence : 
MRVLVVEDDAAVSYWIGAKLNGSGHSCRFSGDGEEALRLLAEEAFDVVVLDRMLPKLDGMEVLKRLNGTRHPPVLVLSAL
DETSDRVAGLRAGADDYLGKPFDFAELLVRLEHLSRRHGQAMAAPGDLLTVGDLVMDVAQRRVTRQGVPIELTDKEFRLL
HILMSNPGQTVTRTMLLEKAWGYGFNPPTNLVEVHVFKLRSKIDKDFDPPLLRTVRAIGYALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-38 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_p20676 YP_004974927.1 Two-component response regulator BAC0125 Protein 6e-39 44
AZOLI_p20676 YP_004974927.1 Two-component response regulator BAC0083 Protein 3e-36 42
AZOLI_p20676 YP_004974927.1 Two-component response regulator BAC0197 Protein 6e-37 42
AZOLI_p20676 YP_004974927.1 Two-component response regulator AE000516.2.gene3505. Protein 4e-29 42
AZOLI_p20676 YP_004974927.1 Two-component response regulator BAC0638 Protein 7e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_p20676 YP_004974927.1 Two-component response regulator VFG1390 Protein 6e-35 46
AZOLI_p20676 YP_004974927.1 Two-component response regulator VFG1389 Protein 2e-32 45
AZOLI_p20676 YP_004974927.1 Two-component response regulator VFG0596 Protein 1e-38 42