Gene Information

Name : AZOLI_p20287 (AZOLI_p20287)
Accession : YP_004974587.1
Strain :
Genome accession: NC_016586
Putative virulence/resistance : Unknown
Product : putative oligopeptide ATP transporter, ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 275272 - 277185 bp
Length : 1914 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence :
ATGAGCGGCGCCGCCGCGATGCGGGCGGTCGACGCAGCACCGGCCCTGCTTTCCGTGGAGGGGCTGAGCGTCGCCTTCGA
CGGCGAGCATGGTCCCGTGCGCGTGGTCGACGACGTCAGCTTCACCGTGGCGCCGGGCGAGACGGTCGCCATCGTCGGCG
AGTCCGGCTCCGGCAAGTCGGTGACCTCGCTGTCGCTGATGCGGCTGGTCGATTATGCCGGCGGCCGCATCGTCGGCGGG
CGCATCCGCTTCAAGGGGCGCGACGGGCGCGAACGCGATCTGGCTTCTCCGCCGGCCGAGGCGCTGACCGACATGCGCGG
CAACGACATCGCCATGGTCTTCCAGGAGCCGATGACGTCGCTGAACCCGGTCTTCACCATCGGCGACCAGATCGCCGAGG
CGGTGATGCTGCACCAGGGTCTCGACCGCAAGGCGGCGCGGGATGAGGCCCTGCGCATGCTGGAGAAGGTGCGGATTCCC
GAACCGGCCCGGCTGCTCGACCGCCATCCGCACCAGCTGTCGGGCGGCATGCGCCAGCGCGTGATGATCGCCATGGCGCT
GTCCTGCAAGCCGTCGCTGTTGATCGCCGACGAGCCGACCACGGCGCTGGACGTCACCATCCAGGCCCAGATCCTGCGGC
TGATCCGTCTGTTGCAGGAAGAGATGGGGATGGGCGTCATCTTCATCACCCACGACATGGGCGTGGTGGCGGAGGTGGCC
GACCGCGTCGTCGTGATGTGGCGCGGCCGCAAGGTGGAGGAGGGCACGGTCGAGCGCATCTTCCAGGCGCCGCAGCACCC
CTACACCAAGGCGCTGCTGTCCGCGGTGCCGAAGCTGGGCGCGCTGCGCGGCCAGGACCTGCCGATGCGTTTCCCGCTGC
TGGTGGTCGATGACGAAAAGCTGGATGCCGCGCCGCCGGCCCCGCCGCCGGTACAGGACACCGTGCGCGCCGTCGACGCT
CCGCTTCTGGAGGTGCGCGACCTCACCACCCGCTTCGACGTGCGCAAGGGCATCTTCGGATCGCTGAAGGCCCGCGTCCA
TGCGGTGGAGAAGGTCAGCTTCGCCGTCCGTCCGGGCGAGACATTGGCGCTGGTCGGCGAATCCGGCTGCGGCAAGTCGA
CCACCGGCCGCACCATCATGGGGCTGCAATCCGCCACCTCCGGCAGCATCCGCTTCGACGGAGTCGAGACCGCGACGCTG
GATTCCAACGGTCAGGCGAAGCTGAAGGAGAAGATCCAGTATATCTTCCAGGATCCCTTCGCCTCGCTGAACCCGCGCAT
GACCGTCGGCTTCAGCGTCGCCGAGCCGATGCTGGTCCATGATTATGTCCCCACCTCCAAGCCGGGCGTGTCGCGCCGCC
GCGCCATCGAGGAGCGGGTGGCGGAGCTGCTGACCCAGGTCGGGCTGAAGCCGGAGCATGCGCGCCGCTATCCGCATGAA
TTCTCCGGCGGCCAGCGCCAGCGCATCTGCATCGCCCGCGCGCTCGCCTGCGATCCCAAGCTGATCATCGCCGACGAGGC
GGTGGCGGCGCTCGACGTGTCGATCCAGGCGCAGATCGTCAACCTGCTGATGGAGCTGCAGGCCAAGCGCGGCCTGTCCT
ACCTGTTCATCAGCCACGACATGGCGGTGGTGGAGCGGGTCAGCCACCGCGTCGCGGTGATGTATCTCGGCCAGATCGTC
GAGCTCGGTCCCCGCCGCGCGGTGTTCGAGAACCCGCAGCACCCCTACACCCGCCGCCTGATGGCGGCGGTGCCCATCGC
CGATCCCAGCCGCCGCACCCGCGACCTGCGGCTGCTGACCGGCGAGATCCCGAGCCCGATCCGCAACATCGGCGACGAGC
CCGCGGTGCAGCCGCTGGTGCCGGTCGGCGATGACCATTTCGTCGCCCGCCACCCCGTTGGCGGCGATTTCTGA

Protein sequence :
MSGAAAMRAVDAAPALLSVEGLSVAFDGEHGPVRVVDDVSFTVAPGETVAIVGESGSGKSVTSLSLMRLVDYAGGRIVGG
RIRFKGRDGRERDLASPPAEALTDMRGNDIAMVFQEPMTSLNPVFTIGDQIAEAVMLHQGLDRKAARDEALRMLEKVRIP
EPARLLDRHPHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDVTIQAQILRLIRLLQEEMGMGVIFITHDMGVVAEVA
DRVVVMWRGRKVEEGTVERIFQAPQHPYTKALLSAVPKLGALRGQDLPMRFPLLVVDDEKLDAAPPAPPPVQDTVRAVDA
PLLEVRDLTTRFDVRKGIFGSLKARVHAVEKVSFAVRPGETLALVGESGCGKSTTGRTIMGLQSATSGSIRFDGVETATL
DSNGQAKLKEKIQYIFQDPFASLNPRMTVGFSVAEPMLVHDYVPTSKPGVSRRRAIEERVAELLTQVGLKPEHARRYPHE
FSGGQRQRICIARALACDPKLIIADEAVAALDVSIQAQIVNLLMELQAKRGLSYLFISHDMAVVERVSHRVAVMYLGQIV
ELGPRRAVFENPQHPYTRRLMAAVPIADPSRRTRDLRLLTGEIPSPIRNIGDEPAVQPLVPVGDDHFVARHPVGGDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 6e-93 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-67 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-67 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-67 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-67 41