Gene Information

Name : Desor_0096 (Desor_0096)
Accession : YP_004968368.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 92177 - 93661 bp
Length : 1485 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence : 
ATGGAGAACACCAACGACCTCTGGCGAATTCGTTTAGATAAGCTTGAGATGTTTCGCCAAGCTGATATTAATCCCTTTGC
GGATCGCTATGTTCGTACACATAAAACGTCTGAAATTTTAGATCGGTTTGAAGAATTAGAGGGTCAGGAAGTTAGCCTTG
CCGGACGAATAATGAGTAAGCGGGATCAGGGGAAAGTAATCTTTACCCACATTCAAGATATAGATGGCCGCCTTCAGATT
TATATCAGAATGGATGATTTGGGCCAGGCAATGTTTGAACTAATATCGAAATTTGATGTGGGAGATATTATTGGCGTACA
AGGAAAGGTGTTTCGCACAAAACGTGGGGAAATTTCCATTCATGCTAAGGAAGTGACATTGCTTTCCAAAGCCATGCGGC
CGCTTCCTGAAAAGTTCCATGGGTTAACGAATGTTGAAACACGTTATCGTCGGCGCTATCTAGATTTAGTGATGAATCCT
GATGTACGCAAAGTGTTTGTGACAAGAAGCAAAATTATCCGCTTTATGAGGGAGTTCTTAGAGGAACGGGATTTCCTGGA
GGTAGAGACTCCGACACTGCATACTATTCCTGGAGGAGCGGCTGCACGTCCTTTTATCACACATCATAACGCCTTAGATA
TTGATCTATACCTGCGGATTGCCCTTGAACTTCCATTAAAACGTTTAATTGTCGGCGGACTTGAAAAGGTATTTGAAATT
GGTCGGACTTTCAGAAATGAAGGAATCTCCATCAAGCATAATCCGGAGTTTACCATGATGGAATTGTATCAGGCCTATGC
AAATTACGAAGATATTATGGAATTAACGGAAGAGATGATTGCCCATATTGTCCAGAGAATACATGGGACACTGGAAATAA
CCTATCAGGGACAAGCTCTGCAGTTTAAAACGCCATGGCGCCGCCTTCCCATGCTGGATGGAATTTTAGAATACTCAGGC
GTTGATTTTAAAGATATTGCTACGGACGAACAAGCACTTCTTGTGGCTAAAGAAAAAGGACTGCATGTGGCCGCTGATGC
CTCTCGCGGGAAGATTATCAATGAGTTTTTCGAAGCTTTTGTCGAACCCAATTTGATACAACCTACATTCATCATAGGCC
ATCCTGTAGAAATATCTCCTTTGGCTAAGCGTAATGCAAAGCAGCCTGAATATACAGATCGGTTTGAAGCTTTTATCTTT
GGCCGGGAGCTGGCCAATGCTTTTTCTGAATTAAACGATCCTATTGATCAACGTCAGCGTTTTGAAGCTCAAGTAGCTGA
GCGTGCTAAAGGGGACGATGAAGCTCACAGCATGGATGAAGATTTCGTCCAGGCATTAGAATATGGGCTTCCTCCTACAG
GCGGACTAGGAATAGGGATAGACCGCTTAGTAATGTTATTAACGGATTCTGCCTCAATTCGGGATGTCATTCTTTTCCCT
ACAATGAGGCCGAGAGACGAAAGTGCTCAGGATGAAGATATGTAA

Protein sequence : 
MENTNDLWRIRLDKLEMFRQADINPFADRYVRTHKTSEILDRFEELEGQEVSLAGRIMSKRDQGKVIFTHIQDIDGRLQI
YIRMDDLGQAMFELISKFDVGDIIGVQGKVFRTKRGEISIHAKEVTLLSKAMRPLPEKFHGLTNVETRYRRRYLDLVMNP
DVRKVFVTRSKIIRFMREFLEERDFLEVETPTLHTIPGGAAARPFITHHNALDIDLYLRIALELPLKRLIVGGLEKVFEI
GRTFRNEGISIKHNPEFTMMELYQAYANYEDIMELTEEMIAHIVQRIHGTLEITYQGQALQFKTPWRRLPMLDGILEYSG
VDFKDIATDEQALLVAKEKGLHVAADASRGKIINEFFEAFVEPNLIQPTFIIGHPVEISPLAKRNAKQPEYTDRFEAFIF
GRELANAFSELNDPIDQRQRFEAQVAERAKGDDEAHSMDEDFVQALEYGLPPTGGLGIGIDRLVMLLTDSASIRDVILFP
TMRPRDESAQDEDM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-113 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_0096 YP_004968368.1 lysyl-tRNA synthetase VFG1668 Protein 1e-113 51