Gene Information

Name : Desor_0566 (Desor_0566)
Accession : YP_004968782.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 558270 - 558938 bp
Length : 669 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCTTTGATTAAAGCACAGGATATCTCAAAACATTATAATAATGGCGAAGACGTGGTTGAAGCCCTAACAGCCATTAA
TCTGGAAATTGAAGAAGGGGAATTTTTAGCTTTGATGGGGCCTTCCGGTTCAGGGAAAAGCACCTTGCTCAGCATTCTTG
GCGCCTTGAACCCGCCGACTTCCGGCAAGCTCATCATCGATGAAATTGATGTCTATGCCTTGCCATCGGAACGGCAAGCT
GATTTTCGCCATGAATATGTGGGGTTTGTCTTCCAGCAATATCAATTAATCCCCTATCTGACCGCTTTGGAAAATGTGAT
GCTCCCTTTGTCCATAACCTCCCGCTCCGGAAAAGAACAGAGGGAAATGGCTCAGAGAGTTTTAGCCCGAGTGGGCCTTG
AATCTAAATCCTGCCGGCTCCCCAGTCAATTGTCCGGAGGCGAGCAAAACCGTGTTGCCATTGCCAGAGCCATTGTCAAT
CAGCCAGCCATCATCTTCGCTGATGAACCCACGGGAAGCCTGGACTCAAAAACAGCAACAGAGCTGTTAGAGCTGTTTAA
AGCCCTCAACCACGAAGGCCTGACCATTATTATGGTAACTCACAATCCGGAAAATCTGGCTTGGGTCAATCGAACCGTTT
ATATCCGGGATGGACTCTTAGCTCAATAA

Protein sequence : 
MSLIKAQDISKHYNNGEDVVEALTAINLEIEEGEFLALMGPSGSGKSTLLSILGALNPPTSGKLIIDEIDVYALPSERQA
DFRHEYVGFVFQQYQLIPYLTALENVMLPLSITSRSGKEQREMAQRVLARVGLESKSCRLPSQLSGGEQNRVAIARAIVN
QPAIIFADEPTGSLDSKTATELLELFKALNHEGLTIIMVTHNPENLAWVNRTVYIRDGLLAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_0566 YP_004968782.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-48 50
Desor_0566 YP_004968782.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-39 46
Desor_0566 YP_004968782.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 9e-40 41