Gene Information

Name : Desor_5611 (Desor_5611)
Accession : YP_004973492.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5835624 - 5836031 bp
Length : 408 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGTTAAATCGTGTCGTTTTGATTGGCCGTTTGACGAAGGACCCCGAATTACGTTATACGCCAAACGGTGTAGCTGTCGC
CAATTTCACATTGGCGGTTGATCGTAATTATAAGAATGCTCAAGGGGAAAGAGATACGGATTTTATTAACATTGTAGTAT
ATCGGCAGCTGGCAGAATTATGTGCTAATTACTTAGCGAAGGGAAAACTGGCTGCTACAGATGGACGAATTCAAGTGCGT
TCTTATACGGGACAAGACGGTCAAAAACGCTGGGTTACAGAGGTTATTGCTGAAGATGTTCGCTTTTTAAGTCCGAAGGA
CAGTGGAAGCGGCTCAGAATCCAGACCTTTCAGCGGAAATAATTCTTTTGGACATGAAGTAAATTTGGATGATGACATCC
CATTCTAA

Protein sequence :
MLNRVVLIGRLTKDPELRYTPNGVAVANFTLAVDRNYKNAQGERDTDFINIVVYRQLAELCANYLAKGKLAATDGRIQVR
SYTGQDGQKRWVTEVIAEDVRFLSPKDSGSGSESRPFSGNNSFGHEVNLDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-31 65
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-31 65
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-31 65
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-28 63
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-31 60
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-31 60
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-31 59
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-31 59
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 8e-31 58
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-30 56
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-31 54
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 9e-24 50
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-24 47
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 8e-25 47