Gene Information

Name : Desor_5284 (Desor_5284)
Accession : YP_004973179.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5485696 - 5486424 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
TTGATAGAGCTTAAAGGGATTAAAAAAATCTATGCCAATGGTGATATAAAAGTTGCAGCTTTAGGGGGAGTGGACCTGTA
TGTAGGTGAAGGAGAGTTTGTCTCCATTATGGGTCCTTCCGGTTCCGGCAAGTCGACAATGATGAATATTTTAGGATGTT
TAGATACCCCGACAGAGGGTGAGTATTACCTGGATGGAACAGATGTGGCAAAAGCCAGCGGTGACGAATTGTCAGTCATT
CGCAATCGTAAGATTGGTTTTGTATTCCAGGGCTTTAATCTCCTGCCCCGTACCATGGCTGTGGAGAATGTGGAACTTCC
CATGCTCTATGCCGGCGTAGGAGGAAAAGAACGACGAGCACGTGCCGTTGCCGCCTTAGAGGCAGTTGGTCTGGGTCAAC
GAATACATCATAAGCCCAAAGAGTTGTCCGGTGGTCAGCAGCAGCGCGTAGCGATTGCCCGGGCCCTTGTCACAAAACCC
TCGATCATTTTGGCTGATGAGCCTACTGGGAATCTGGACAGCCGTTCCAGTGAAGAGGTTATGGCGATTTTCCAGCAGCT
CCATGCCCAGGGCAATACCATTGTTATTGTGACCCATGAACCGGATATCGCAGAATTTACTGAACGGGTTGTGCGTTTCC
GCGACGGACATATTGAAGGGGACGAAATTGTAAAGAATCCGCGTAAGGCTCGAGTACAAGCCGTCGAGGAGGAAGGAGGA
GCAGAGTGA

Protein sequence : 
MIELKGIKKIYANGDIKVAALGGVDLYVGEGEFVSIMGPSGSGKSTMMNILGCLDTPTEGEYYLDGTDVAKASGDELSVI
RNRKIGFVFQGFNLLPRTMAVENVELPMLYAGVGGKERRARAVAALEAVGLGQRIHHKPKELSGGQQQRVAIARALVTKP
SIILADEPTGNLDSRSSEEVMAIFQQLHAQGNTIVIVTHEPDIAEFTERVVRFRDGHIEGDEIVKNPRKARVQAVEEEGG
AE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_5284 YP_004973179.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-54 56
Desor_5284 YP_004973179.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 4e-42 50
Desor_5284 YP_004973179.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 5e-40 45
Desor_5284 YP_004973179.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-38 42