Gene Information

Name : Desor_5255 (Desor_5255)
Accession : YP_004973150.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5452092 - 5452817 bp
Length : 726 bp
Strand : -
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH

DNA sequence :
ATGCAGCGTTCCAATGGCCGAGGAAATCATGAATTACGTCCTGTTAAAATTACGCGGAAGTTTACGAACATACCGGAAGG
TTCCGTCCTGATAGAGATCGGAGAAACAAGGGTTTTGTGTACAGCCAGTATTGAAGAAAAAGTGCCCCATTTTCAGAAAG
GGACAGGCAAAGGCTGGGTTACGGCAGAATATGCCATGATCCCGCGAGCTACTCAAACTCGCACCCAACGAGAGGCAAGT
AAAGGTAAACTTACTGGCCGTACTATGGAAATTCAACGACTCATAGGCCGAGCCTTGCGATCGGTTATTGATTTGAAAAA
GCTTGGTGAGCGAACAATCTGGCTGGATTGTGATGTCTTGCAAGCCGATGGGGGAACTCGTACGGCGTCTATTACCGGAG
CCTATGTAGCGATGATGGATGCTGTTCAATTCTTGTTGGAGAAGAAGCTTATTAAGGCAAATCCGGTGTTGGATTCCTTA
GCCGCTGTTTCCGTCGGAAAAGTTCTGGGAACTGGGGTTCTAGACTTAGAATACGAAGAAGATTCTCAGGCGGAAGTAGA
TATGAATATTGTTATGACTGGGTCAGGCAAGTTCGTAGAAATTCAAGGGACTGCTGAAGAAGTACCCTTTGATCGCGAAG
ATCTCAACAACTTTTTAGAGTTGGCTGAAAAGGGAATTCGCTCCTTAATGGACGTTCAGAAATCCGCGCTGGAGACAAAC
ACATGA

Protein sequence :
MQRSNGRGNHELRPVKITRKFTNIPEGSVLIEIGETRVLCTASIEEKVPHFQKGTGKGWVTAEYAMIPRATQTRTQREAS
KGKLTGRTMEIQRLIGRALRSVIDLKKLGERTIWLDCDVLQADGGTRTASITGAYVAMMDAVQFLLEKKLIKANPVLDSL
AAVSVGKVLGTGVLDLEYEEDSQAEVDMNIVMTGSGKFVEIQGTAEEVPFDREDLNNFLELAEKGIRSLMDVQKSALETN
T

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-68 58