|
Name : Desor_5197 (Desor_5197) Accession : YP_004973096.1 Strain : Desulfosporosinus orientis DSM 765 Genome accession: NC_016584 Putative virulence/resistance : Virulence Product : capsular exopolysaccharide biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 5389796 - 5390500 bp Length : 705 bp Strand : - Note : PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family DNA sequence : TTGACATTAATAACGCACGAACAAACGAAATCCCCCATCTCCGAAGCCTACCGGACGCTTCGGACGAATGTACAGTTTAC CAGTATAGATACTAAGACCAAAAGAATCATGGTCACAAGCTCAGGTCCCCGGGAAGGGAAATCCACCACCGTCGCGAACC TGGCTGTGAGTATGGCTCAATCCGGAAAATCTGTTTTAGTGATAGACGCTGATTTGCGTAACCCAACCCAACACAAACTA TTTGAGCTGGAGAATTTTGAGGGACTCTCAAACTTTCTGGTTCAAGATGATCAGGATAAAGACTTTATTAGGGAAACAGC GGTACCCAGGGTTAAAGTCCTTACGGGAGGTCCCATTCCTCCCAATCCGGCTGAGCTCGTCGGCTCCCAGCGGATGAAGC GTCTGATTGAGGAAGTCAGTGAACTCTATGATGTGGTCCTTATCGATACGCCACCTATCATTGCTGTGACAGATGCCGCG GTTCTTGCTCAGGAAGTAGATGGAGTCATCTTGGTCTTAGCTTCAGGGGAAGTCAACAAAGAATATGCCCAACGGGCCAA GGATCAGCTGGATAAGGTAGGGGCCAAGATACTTGGGGCTGTTATCAATAAAGCTGACCTGAAAACCAGTGAATACTATT ATTACTATTACTACCATGGCAGCGATGATCCTAAGAAGAAAAGGACTCGTAAGAATCGTTCATAG Protein sequence : MTLITHEQTKSPISEAYRTLRTNVQFTSIDTKTKRIMVTSSGPREGKSTTVANLAVSMAQSGKSVLVIDADLRNPTQHKL FELENFEGLSNFLVQDDQDKDFIRETAVPRVKVLTGGPIPPNPAELVGSQRMKRLIEEVSELYDVVLIDTPPIIAVTDAA VLAQEVDGVILVLASGEVNKEYAQRAKDQLDKVGAKILGAVINKADLKTSEYYYYYYYHGSDDPKKKRTRKNRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0061 | YP_300151.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 4e-38 | 45 |
| cap1B | AAA64641.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-37 | 45 |
