Gene Information

Name : Desor_4804 (Desor_4804)
Accession : YP_004972720.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4998731 - 4999417 bp
Length : 687 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB

DNA sequence :
GTGGCAACAATCTTAGTCGTTGATGACGAGGAACCAATTCTTGAACTTCTCAGATTCAACTTGGAAAAGGAAGGGTATTT
GGTTTGTCTTGCGAAAGATGGTCAGGAAGCTTTGGATTTAGTTGAGAAGGAACAGCCTGACCTTGTGGTGTTGGATCTTA
TGCTGCCGGGGATGGATGGCCTGGAGGTCTGCCGCAGAATTCGCTTTATTCCAAAGTATCAGCAGATTCCTATTATCATG
TTGACTGCTAAAGGTGAGGTCATTGACAAGGTTTTAGGGCTTGAACTGGGAGCCGATGACTATATGACAAAACCCTTTAG
TCCTCGTGAGTTGATTGCCAGAATTAAAGCTCGTCTTCGCCGGATCAATTTGCCTGAAGAGAGTGATTCTCAGCTCATTC
GGGGAGAATTGCGAATCGATATCAAAGGTTTCCGAGTTTATGTTCGAGGGGCAGAGACAGAGTTAACCCCTAAGGAGTTT
GAACTTCTGCGTGTTTTGGCAGCACATCCCGGCAGGGTTTATTCAAGAGATGATTTATTGGAAAGAATATGGGGTTATGA
ATATGATGGGGATACTCGTACGGTTGATGTTCATGTTAGGCACTTGCGTCTAAAAATTGAACAGGATCCCTCCAATCCTG
AGTATATTGAGACATTACGCGGCATTGGTTACCGCTTTAAAGGATAG

Protein sequence :
MATILVVDDEEPILELLRFNLEKEGYLVCLAKDGQEALDLVEKEQPDLVVLDLMLPGMDGLEVCRRIRFIPKYQQIPIIM
LTAKGEVIDKVLGLELGADDYMTKPFSPRELIARIKARLRRINLPEESDSQLIRGELRIDIKGFRVYVRGAETELTPKEF
ELLRVLAAHPGRVYSRDDLLERIWGYEYDGDTRTVDVHVRHLRLKIEQDPSNPEYIETLRGIGYRFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-36 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 5e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 6e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 5e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 6e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 5e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 6e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 6e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 6e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 6e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 6e-49 54
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-44 53
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 8e-44 51
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 9e-51 51
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 1e-49 50
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 5e-42 50
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 7e-39 45
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 2e-38 44
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 3e-33 44
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 2e-33 44
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 3e-33 44
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 3e-35 43
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 8e-33 43
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 8e-33 43
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 1e-32 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 1e-31 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 1e-32 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 6e-36 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 6e-36 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 3e-31 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 3e-32 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 3e-33 42
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 1e-32 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 1e-28 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001485.1.gene721.p Protein 6e-23 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001581.1.gene280.p Protein 1e-25 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 5e-24 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 4e-27 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 6e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-32 43
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 4e-28 43
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 1e-36 41
Desor_4804 YP_004972720.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 2e-37 41