Gene Information

Name : Desor_4538 (Desor_4538)
Accession : YP_004972459.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4715061 - 4715756 bp
Length : 696 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAAGTCAAAAGTAGTCCTGTTAGTCGATGATGATCCATCCATTCAGAAACTTTTAAAGGCAGCATTGGAAAAGAACGG
TTACACGACAATGCCTTGTTCATCGGGAGAAGCCGCACTGGAAAAGCTTGAACAAAACGACCTCGACGCTGTAATTTTAG
ATGTAGTCCTTCCCAATATGGACGGTTGGGATGTCTTAAAATGGATTAGAAACTACCCAAGTTATAAACATCTGCCAGTA
ATCATGTTAACTTGCAAGGATAGTGAAATCGAAACTGTCCTGGGGCTGGAAATGGGAGCCGATGATTATCTTAGTAAACC
TGTCCGCTATCATGAACTCATGGCCCGCTTAAAGAAGGCCTTTAAAAAAAATGAAGGTTTACCAAATTGTACTAAGATGC
TGTGTATTCACGGCATTGAAATTGACCATGACAGCAGAGCTGTTTATCTGAACAAAGTATTGCTTCCTTTAACCTACCGT
GAATTTGAACTTTTGACATTACTGGTCAAAAACCCCGGCAAAGTTTTTACAAGAGATCATCTCCTTGATTTATTATGGCA
TGATGAACAATTTCTAGAGACTCGAACAGTTGATGTACATATTCGCCGCTTAAGAAAAAAACTCCAAGATCACGGCGGAA
ATCCAGATATCATCGAAACTATTCGTAGTATAGGTTATCGGATGATAAGCGTCTGA

Protein sequence : 
MKSKVVLLVDDDPSIQKLLKAALEKNGYTTMPCSSGEAALEKLEQNDLDAVILDVVLPNMDGWDVLKWIRNYPSYKHLPV
IMLTCKDSEIETVLGLEMGADDYLSKPVRYHELMARLKKAFKKNEGLPNCTKMLCIHGIEIDHDSRAVYLNKVLLPLTYR
EFELLTLLVKNPGKVFTRDHLLDLLWHDEQFLETRTVDVHIRRLRKKLQDHGGNPDIIETIRSIGYRMISV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 4e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 5e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 4e-38 44
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_4538 YP_004972459.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 3e-36 41