Gene Information

Name : Desor_4174 (Desor_4174)
Accession : YP_004972125.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4308045 - 4308785 bp
Length : 741 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGAGTGAAGTTAAAGAGCCAAGGAGAAGGGATTTGCCAGAAGAAAAGAAGATTAGAGGATGTGAGGTCAGGCTGGACCA
AGTTAGTAAAGAATACACCCAGGGCGCGGAAAGGATAACGGCTCTGGATCAAATAAGTTTGGAAGTAAAAAGCGGCAAAT
TCCTAGCCATAATGGGGGCCAGCGGGTCGGGGAAATCTACGTTGCTGAATTTAGTGGCCGGATTGGATAAGCCCAGCCAA
GGGGAGATTTTCCTCAACGGTCAGGCAATTTCCGGTTGGACGGATAATCAGCTGACCATATTTCGCCGGCAGGAATTAGG
GTTTATCTTTCAGTTATTCAATCTGATCCCTACTTTAAGTGCCGAGGAGAATGCCGCTTTGCCTTTACTTATGGCCGGCC
GGCCCCGCTCAGTCTGGCAGCCGCAGGTTGACCGCTGGCTGAAACGAGTGGGTCTGGAGAGCCGGAGAAAAAACTACCCG
GCGGAATTGTCGGGAGGACAGATGCAGAGAATAGCTATCATACGGGCCCTCATTCATCGCCCCGCTCTTATTCTGGCCGA
CGAGCCTACAGGAAACCTGGATTCCAAGACGGGAGATGAGATGCTCTTCATATTGAAAGAAATTACGGAGGACTTGGGAG
TAACCCTGATTATGGTTACCCATAATCCTATGGTCGCCGCTTACGGACATACGCTGGTTACCCTGAAAGACGGACGAATC
CTTGATTCCACGGCGAGGTGA

Protein sequence :
MSEVKEPRRRDLPEEKKIRGCEVRLDQVSKEYTQGAERITALDQISLEVKSGKFLAIMGASGSGKSTLLNLVAGLDKPSQ
GEIFLNGQAISGWTDNQLTIFRRQELGFIFQLFNLIPTLSAEENAALPLLMAGRPRSVWQPQVDRWLKRVGLESRRKNYP
AELSGGQMQRIAIIRALIHRPALILADEPTGNLDSKTGDEMLFILKEITEDLGVTLIMVTHNPMVAAYGHTLVTLKDGRI
LDSTAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_4174 YP_004972125.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 5e-42 46
Desor_4174 YP_004972125.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-47 45
Desor_4174 YP_004972125.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 6e-39 45
Desor_4174 YP_004972125.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-39 41