Gene Information

Name : Desor_3975 (Desor_3975)
Accession : YP_004971934.1
Strain : Desulfosporosinus orientis DSM 765
Genome accession: NC_016584
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4091844 - 4092542 bp
Length : 699 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAATGATGAAAAAGTGAAAGTGCTGGTCGTGGAAGATGAAGAATCTATCCGGCGCTTTATTACCCTTAATTTAAGCGC
AGCCGGTTACTTGGTGAGTGATACGGCCACTGGTGAAGATGCCCTGGCTATGCTGAAGACCTTTGTTCCCAAAGTTGTTG
TGCTGGACCTGATGCTGCCGGGAATCAGCGGCTTGGAAGTTTGCCAGCAAATCAGGGAAACCATTCCCGAAACCTTCGTG
ATTATGCTCACGGCCAAAGGTCAGGATACAGATAAAATTTTGGGACTGGAATTAGGGGCCGATGATTACATGGTCAAACC
TTTTAACCCCTTGGAATTAATAGCTCGAATTAAAGCCATCCTGCGGCGGGGGATGAATATTAGAGTCAGCAAAGAAGTGT
ACAAATGCGGGGATTTAAGCCTGGATATTACAGCTAATAAACTTTATAAAAATGACCAAGAAGTAGAGCTGACTCCCATT
GAGTTTGCTTTACTGAAAGTATTTATGAAAAATCCTGGGAGGGCACTCAAACGGGAAGAAATGCTGAATACTGTTTGGGG
TGATGATTATTTTGGAGATACCAAAACCTTGGATGTCCACATTAGGCGCTTACGGGAAAAAATTGAGGACGAGCCTTCGC
AGCCGAAATATATTAAGACCATCTGGGGTTCCGGCTATCGCTGGCAGCAGGAATCATAG

Protein sequence :
MNDEKVKVLVVEDEESIRRFITLNLSAAGYLVSDTATGEDALAMLKTFVPKVVVLDLMLPGISGLEVCQQIRETIPETFV
IMLTAKGQDTDKILGLELGADDYMVKPFNPLELIARIKAILRRGMNIRVSKEVYKCGDLSLDITANKLYKNDQEVELTPI
EFALLKVFMKNPGRALKREEMLNTVWGDDYFGDTKTLDVHIRRLREKIEDEPSQPKYIKTIWGSGYRWQQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-38 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 3e-39 45
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 2e-33 44
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 3e-40 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 3e-40 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 6e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 4e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 4e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 5e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 4e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 4e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 4e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 3e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 4e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 4e-41 43
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-38 42
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 1e-34 41
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 8e-36 41
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain EU250284.1.orf4.gene Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 3e-38 42
Desor_3975 YP_004971934.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 4e-38 42